Mercurial > repos > pimarin > data_manager_fetch_plasmidfinder

comparison data_manager/plasmidfinder_fetch_database.py @ 2:bd56ac4cca16 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 704e7cba33e85648198babefb4d82df66c6709f8
author pimarin
date Fri, 17 Feb 2023 08:04:44 +0000
parents 9ef108e34063
children 5ffc68b4ec04
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1:9ef108e34063 2:bd56ac4cca16
53 plasmidfinder_name = f"{version_value}" \ 53 plasmidfinder_name = f"{version_value}" \
54 f"_{self._plasmidfinder_date_version}" 54 f"_{self._plasmidfinder_date_version}"
55 data_info = dict(value=plasmidfinder_value, 55 data_info = dict(value=plasmidfinder_value,
56 name=plasmidfinder_name, 56 name=plasmidfinder_name,
57 date=self._plasmidfinder_date_version, 57 date=self._plasmidfinder_date_version,
58 path=self._db_name) 58 path="plasmidfinder_database")
59 self.plasmidfinder_table_list["data_tables"][self.data_table_name] = [data_info] 59 self.plasmidfinder_table_list["data_tables"][self.data_table_name] = [data_info]
60 return self.plasmidfinder_table_list 60 return self.plasmidfinder_table_list
61 61
62 62
63 class DownloadPlasmidfinderDatabase(GetPlasmidfinderDataManager): 63 class DownloadPlasmidfinderDatabase(GetPlasmidfinderDataManager):