Mercurial > repos > pimarin > data_manager_fetch_plasmidfinder

comparison data_manager_conf.xml @ 5:60cfd33bc2fb draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 0a3992c5be846fc9f18b7ca18f0adcd78f5b9396-dirty
author pimarin
date Mon, 24 Jul 2023 10:00:33 +0000
parents 8ad77a9dc91d
children 4e933a39094f
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4:e05fd47bcca6 5:60cfd33bc2fb
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <data_managers> 2 <data_managers>
3 <data_manager tool_file="data_manager/plasmidfinder_fetch_database.xml" id="plasmidfinder_fetch_database" version="@TOOL_VERSION@"> 3 <data_manager tool_file="data_manager/plasmidfinder_fetch_database.xml" id="plasmidfinder_fetch_database">
4 <data_table name="plasmidfinder_database"> 4 <data_table name="plasmidfinder_database">
5 <output> 5 <output>
6 <column name="value" /> 6 <column name="value" />
7 <column name="name" /> 7 <column name="name" />
8 <column name="date" /> 8 <column name="date" />
9 <column name="path" output_ref="output_file"> 9 <column name="path" output_ref="output_file">
10 <move type="directory" relativize_symlinks="True"> 10 <move type="directory" relativize_symlinks="True">
11 <source>${path}</source> 11 <source>${path}</source>
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">plasmidfinder-db/${name}</target> 12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">plasmidfinder_database/${name}</target>
13 </move> 13 </move>
14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/plasmidfinder-db/${name}</value_translation> 14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/plasmidfinder_database/${name}</value_translation>
15 <value_translation type="function">abspath</value_translation> 15 <value_translation type="function">abspath</value_translation>
16 </column> 16 </column>
17 </output> 17 </output>
18 </data_table> 18 </data_table>
19 </data_manager> 19 </data_manager>