Mercurial > repos > pimarin > data_manager_fetch_plasmidfinder

annotate data_manager_conf.xml @ 1:9ef108e34063 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 32f035f6404452fc8a1cf01d71be3c0b46548338
author pimarin
date Wed, 15 Feb 2023 10:35:15 +0000
parents 8ad77a9dc91d
children 60cfd33bc2fb
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
1 <?xml version="1.0"?>
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
2 <data_managers>
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
3 <data_manager tool_file="data_manager/plasmidfinder_fetch_database.xml" id="plasmidfinder_fetch_database" version="@TOOL_VERSION@">
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
4 <data_table name="plasmidfinder_database">
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
5 <output>
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
6 <column name="value" />
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
7 <column name="name" />
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
8 <column name="date" />
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
9 <column name="path" output_ref="output_file">
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
10 <move type="directory" relativize_symlinks="True">
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
11 <source>${path}</source>
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">plasmidfinder-db/${name}</target>
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
13 </move>
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/plasmidfinder-db/${name}</value_translation>
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
15 <value_translation type="function">abspath</value_translation>
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
16 </column>
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
17 </output>
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
18 </data_table>
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
19 </data_manager>
8ad77a9dc91d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit f3383fdb9a17d1b69d05547cdb96534a5f762bec-dirty
pimarin
parents:
diff changeset
20 </data_managers>