Mercurial > repos > pimarin > data_manager_build_amrfinderplus

annotate data_manager_conf.xml @ 1:75f79148cb06 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit dd78d1ba0f784a0a122159c4a6d192b8d65f6a8c-dirty
author pimarin
date Thu, 22 Dec 2022 09:51:41 +0000
parents 43ec3aadda50
children
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43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
1 <?xml version="1.0"?>
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
2 <data_managers>
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
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3 <data_manager tool_file="data_manager/data_manager_build_amrfinderplus.xml" id="data_manager_build_amrfinderplus" version="@TOOL_VERSION@">
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
4 <data_table name="amrfinderplus_database">
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
5 <output>
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
6 <column name="value" />
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
7 <column name="name" />
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
8 <column name="path" output_ref="output_file">
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
9 <move type="directory" relativize_symlinks="True">
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
10 <source>${path}</source>
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">amrfinderplus-db/${value}</target>
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
12 </move>
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/amrfinderplus-db/${value}</value_translation>
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
14 <value_translation type="function">abspath</value_translation>
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
15 </column>
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
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16 </output>
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
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17 </data_table>
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
diff changeset
18 </data_manager>
43ec3aadda50 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_amrfinderplus commit 60348db40f25b746db8fd85d6d62ff7569ce28d3
pimarin
parents:
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19 </data_managers>