Mercurial > repos > pimarin > data_manager_bakta
diff data_manager_conf.xml @ 1:faae5d8ce0cb draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bakta commit 4c11a77fb4c0bb74c0c4ae381c85971e01ed973e-dirty
| author | pimarin |
|---|---|
| date | Thu, 27 Oct 2022 13:54:13 +0000 |
| parents | 9d08486abf8e |
| children | decc1723cf97 |
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--- a/data_manager_conf.xml Wed Aug 17 14:42:22 2022 +0000 +++ b/data_manager_conf.xml Thu Oct 27 13:54:13 2022 +0000 @@ -1,15 +1,17 @@ <data_managers> - <data_manager tool_file="data_manager/bakta_build_database.xml" id="bakta_build_database" version="2.1.1+galaxy0"> + <data_manager tool_file="data_manager/bakta_build_database.xml" id="data_manager_build_bakta_database" version="2.1.1+galaxy0"> <data_table name="bakta_database"> <output> <column name="value"/> - <column name="name"/> + <column name="dbkey"/> + <column name="database_record"/> + <column name="bakta_version"/> <column name="path" output_ref="output_file"> <move type="directory" relativize_symlinks="True"> <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> - <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/bakta_database/${name}</target> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">bakta_database/${dbkey}/${path}</target> </move> - <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/bakta_database/${name}/${path}</value_translation> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/bakta_database/${dbkey}/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output>