Mercurial > repos > pimarin > data_manager_bakta

comparison data_manager_conf.xml @ 16:718080c30a76 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bakta commit e7c35e529ae95a2c9f2ecd87a3716e6866feabfa
author pimarin
date Fri, 04 Nov 2022 15:46:06 +0000
parents bcac3aa1f494
children b165d8c97c15
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15:ac4d5e1d1421 16:718080c30a76
2 <data_manager tool_file="data_manager/bakta_build_database.xml" id="bakta_build_database" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> 2 <data_manager tool_file="data_manager/bakta_build_database.xml" id="bakta_build_database" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
3 <data_table name="bakta_database"> 3 <data_table name="bakta_database">
4 <output> 4 <output>
5 <column name="value"/> 5 <column name="value"/>
6 <column name="dbkey"/> 6 <column name="dbkey"/>
7 <column name="database_record"/>
8 <column name="bakta_version"/> 7 <column name="bakta_version"/>
9 <column name="path" output_ref="output_file"> 8 <column name="path" output_ref="output_file">
10 <move type="directory" relativize_symlinks="True"> 9 <move type="directory" relativize_symlinks="True">
11 <source>${path}</source> 10 <source>${path}</source>
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">bakta_database/${dbkey}/${path}</target> 11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">bakta_database/${value}</target>
13 </move> 12 </move>
14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/bakta_database/${dbkey}/${path}</value_translation> 13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/bakta_database/${value}</value_translation>
15 <value_translation type="function">abspath</value_translation> 14 <value_translation type="function">abspath</value_translation>
16 </column> 15 </column>
17 </output> 16 </output>
18 </data_table> 17 </data_table>
19 </data_manager> 18 </data_manager>
20 </data_managers> 19 </data_managers>