Mercurial > repos > pimarin > bakta
diff test-data/TEST_4/TEST_4.gff3 @ 3:eea334d9988b draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 73af464cc860250c3fa3dd433602283ab5a44f53-dirty
| author | pimarin |
|---|---|
| date | Thu, 22 Dec 2022 15:01:43 +0000 |
| parents | ca9e2125c5de |
| children | 8c7499c6f32a |
line wrap: on
line diff
--- a/test-data/TEST_4/TEST_4.gff3 Wed Aug 17 10:29:37 2022 +0000 +++ b/test-data/TEST_4/TEST_4.gff3 Thu Dec 22 15:01:43 2022 +0000 @@ -1,15 +1,13 @@ ##gff-version 3 ##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo # Annotated with Bakta -# Software: v1.4.2 -# Database: v3.0 +# Software: v1.6.1 +# Database: v4.0 # DOI: 10.1099/mgen.0.000685 # URL: github.com/oschwengers/bakta -##sequence-region p2 1 3306 -p2 Bakta region 1 3306 . + . ID=p2;Name=p2;Is_circular=true -p2 Prodigal gene 2 736 . + . ID=DOGAIA_00005_gene;locus_tag=DOGAIA_00005 -p2 Prodigal CDS 2 736 . + 0 ID=DOGAIA_00005;Name=hypothetical protein;locus_tag=DOGAIA_00005;product=hypothetical protein;Parent=DOGAIA_00005_gene;inference=ab initio prediction:Prodigal:2.6 -p2 Prodigal gene 971 1351 . - . ID=DOGAIA_00010_gene;locus_tag=DOGAIA_00010 -p2 Prodigal CDS 971 1351 . - 0 ID=DOGAIA_00010;Name=hypothetical protein;locus_tag=DOGAIA_00010;product=hypothetical protein;Parent=DOGAIA_00010_gene;inference=ab initio prediction:Prodigal:2.6 -p2 Prodigal gene 1348 2388 . - . ID=DOGAIA_00015_gene;locus_tag=DOGAIA_00015;gene=mock1 -p2 Prodigal CDS 1348 2388 . - 0 ID=DOGAIA_00015;Name=mock hypothetical user protein 1;locus_tag=DOGAIA_00015;product=mock hypothetical user protein 1;gene=mock1;Parent=DOGAIA_00015_gene;inference=ab initio prediction:Prodigal:2.6;Note=USERDB:MOCK1;ec_number=0.0.0.0 +##sequence-region p2 1 1330 +p2 Bakta region 1 1330 . + . ID=p2;Name=p2;Is_circular=true +p2 Prodigal gene 413 736 . + . ID=IHHALP_00005_gene;locus_tag=IHHALP_00005 +p2 Prodigal CDS 413 736 . + 0 ID=IHHALP_00005;Name=hypothetical protein;locus_tag=IHHALP_00005;product=hypothetical protein;Parent=IHHALP_00005_gene;inference=ab initio prediction:Prodigal:2.6 +p2 Prodigal gene 971 1471 . - . ID=IHHALP_00010_gene;locus_tag=IHHALP_00010 +p2 Prodigal CDS 971 1471 . - 0 ID=IHHALP_00010;Name=hypothetical protein;locus_tag=IHHALP_00010;product=hypothetical protein;Parent=IHHALP_00010_gene;inference=ab initio prediction:Prodigal:2.6