Mercurial > repos > pimarin > bakta

comparison test-data/TEST_4/TEST_4.gff3 @ 3:eea334d9988b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 73af464cc860250c3fa3dd433602283ab5a44f53-dirty
author pimarin
date Thu, 22 Dec 2022 15:01:43 +0000
parents ca9e2125c5de
children 8c7499c6f32a
comparison
equal deleted inserted replaced
2:ca9e2125c5de 3:eea334d9988b
1 ##gff-version 3 1 ##gff-version 3
2 ##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo 2 ##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
3 # Annotated with Bakta 3 # Annotated with Bakta
4 # Software: v1.4.2 4 # Software: v1.6.1
5 # Database: v3.0 5 # Database: v4.0
6 # DOI: 10.1099/mgen.0.000685 6 # DOI: 10.1099/mgen.0.000685
7 # URL: github.com/oschwengers/bakta 7 # URL: github.com/oschwengers/bakta
8 ##sequence-region p2 1 3306 8 ##sequence-region p2 1 1330
9 p2 Bakta region 1 3306 . + . ID=p2;Name=p2;Is_circular=true 9 p2 Bakta region 1 1330 . + . ID=p2;Name=p2;Is_circular=true
10 p2 Prodigal gene 2 736 . + . ID=DOGAIA_00005_gene;locus_tag=DOGAIA_00005 10 p2 Prodigal gene 413 736 . + . ID=IHHALP_00005_gene;locus_tag=IHHALP_00005
11 p2 Prodigal CDS 2 736 . + 0 ID=DOGAIA_00005;Name=hypothetical protein;locus_tag=DOGAIA_00005;product=hypothetical protein;Parent=DOGAIA_00005_gene;inference=ab initio prediction:Prodigal:2.6 11 p2 Prodigal CDS 413 736 . + 0 ID=IHHALP_00005;Name=hypothetical protein;locus_tag=IHHALP_00005;product=hypothetical protein;Parent=IHHALP_00005_gene;inference=ab initio prediction:Prodigal:2.6
12 p2 Prodigal gene 971 1351 . - . ID=DOGAIA_00010_gene;locus_tag=DOGAIA_00010 12 p2 Prodigal gene 971 1471 . - . ID=IHHALP_00010_gene;locus_tag=IHHALP_00010
13 p2 Prodigal CDS 971 1351 . - 0 ID=DOGAIA_00010;Name=hypothetical protein;locus_tag=DOGAIA_00010;product=hypothetical protein;Parent=DOGAIA_00010_gene;inference=ab initio prediction:Prodigal:2.6 13 p2 Prodigal CDS 971 1471 . - 0 ID=IHHALP_00010;Name=hypothetical protein;locus_tag=IHHALP_00010;product=hypothetical protein;Parent=IHHALP_00010_gene;inference=ab initio prediction:Prodigal:2.6
14 p2 Prodigal gene 1348 2388 . - . ID=DOGAIA_00015_gene;locus_tag=DOGAIA_00015;gene=mock1
15 p2 Prodigal CDS 1348 2388 . - 0 ID=DOGAIA_00015;Name=mock hypothetical user protein 1;locus_tag=DOGAIA_00015;product=mock hypothetical user protein 1;gene=mock1;Parent=DOGAIA_00015_gene;inference=ab initio prediction:Prodigal:2.6;Note=USERDB:MOCK1;ec_number=0.0.0.0