Mercurial > repos > pimarin > bakta
comparison test-data/TEST_2/TEST_2.log @ 10:ed4bc0577be6 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 274e2f6740711cf7709d44951b9ff70c199d5be7
| author | pimarin |
|---|---|
| date | Mon, 23 Jan 2023 16:41:16 +0000 |
| parents | 8c7499c6f32a |
| children |
comparison
equal
deleted
inserted
replaced
| 9:8c7499c6f32a | 10:ed4bc0577be6 |
|---|---|
| 1 | |
| 1 parse genome sequences... | 2 parse genome sequences... |
| 2 imported: 1 | 3 imported: 1 |
| 3 filtered & revised: 1 | 4 filtered & revised: 1 |
| 4 plasmids: 1 | 5 plasmids: 1 |
| 5 | 6 |
| 74 sORFs: 0 | 75 sORFs: 0 |
| 75 gaps: 0 | 76 gaps: 0 |
| 76 oriCs/oriVs: 0 | 77 oriCs/oriVs: 0 |
| 77 oriTs: 0 | 78 oriTs: 0 |
| 78 | 79 |
| 79 export annotation results to: /tmp/tmpmnqj1xog/job_working_directory/000/4/working | 80 export annotation results to: /tmp/tmptbkng6kx/job_working_directory/000/4/working |
| 80 human readable TSV... | 81 human readable TSV... |
| 81 GFF3... | 82 GFF3... |
| 82 INSDC GenBank & EMBL... | 83 INSDC GenBank & EMBL... |
| 83 genome sequences... | 84 genome sequences... |
| 84 feature nucleotide sequences... | 85 feature nucleotide sequences... |
| 85 translated CDS sequences... | 86 translated CDS sequences... |
| 87 circular genome plot... | |
| 86 hypothetical TSV... | 88 hypothetical TSV... |
| 87 translated hypothetical CDS sequences... | 89 translated hypothetical CDS sequences... |
| 88 machine readable JSON... | 90 machine readable JSON... |
| 89 genome and annotation summary... | 91 genome and annotation summary... |
| 90 | 92 |
| 91 If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685 | 93 If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685 |
| 92 Annotation successfully finished in 0:00 [mm:ss]. | 94 Annotation successfully finished in 0:01 [mm:ss]. |