Mercurial > repos > pimarin > bakta

comparison test-data/TEST_2/TEST_2.txt @ 2:ca9e2125c5de draft

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"planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/bakta commit fe1cdf884df206d842be4f0768acb06b0bbcf56f"
author pimarin
date Wed, 17 Aug 2022 10:29:37 +0000
parents 4d315de96666
children eea334d9988b
comparison
equal deleted inserted replaced
1:728e602cd3f7 2:ca9e2125c5de
1 Sequence(s): 1 Sequence(s):
2 Length: 5501884 2 Length: 3306
3 Count: 2 3 Count: 1
4 GC: 50.5 4 GC: 43.4
5 N50: 5498578 5 N50: 3306
6 N ratio: 0.0 6 N ratio: 0.0
7 coding density: 88.1 7 coding density: 65.2
8 8
9 Annotation: 9 Annotation:
10 tRNAs: 107 10 tRNAs: 0
11 tmRNAs: 1 11 tmRNAs: 0
12 rRNAs: 7 12 rRNAs: 0
13 ncRNAs: 57 13 ncRNAs: 0
14 ncRNA regions: 1 14 ncRNA regions: 0
15 CRISPR arrays: 0 15 CRISPR arrays: 0
16 CDSs: 5291 16 CDSs: 3
17 hypotheticals: 5289 17 hypotheticals: 3
18 signal peptides: 0 18 signal peptides: 0
19 sORFs: 1 19 sORFs: 0
20 gaps: 0 20 gaps: 0
21 oriCs: 0 21 oriCs: 0
22 oriVs: 0 22 oriVs: 0
23 oriTs: 0 23 oriTs: 0
24 24
25 Bakta: 25 Bakta:
26 Software: v1.4.0 26 Software: v1.4.2
27 Database: v3.0 27 Database: v3.0
28 DOI: 10.1099/mgen.0.000685 28 DOI: 10.1099/mgen.0.000685
29 URL: github.com/oschwengers/bakta 29 URL: github.com/oschwengers/bakta