Mercurial > repos > pimarin > bakta

comparison test-data/TEST_2/TEST_2.log @ 9:8c7499c6f32a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 5e03f5cfb2216af80ad3ca499504ebdb92ade2c5
author pimarin
date Mon, 23 Jan 2023 16:29:03 +0000
parents eea334d9988b
children ed4bc0577be6
comparison
equal deleted inserted replaced
8:c75629db91ff 9:8c7499c6f32a
1
2 parse genome sequences... 1 parse genome sequences...
3 imported: 1 2 imported: 1
4 filtered & revised: 1 3 filtered & revised: 1
5 plasmids: 1 4 plasmids: 1
6 5
75 sORFs: 0 74 sORFs: 0
76 gaps: 0 75 gaps: 0
77 oriCs/oriVs: 0 76 oriCs/oriVs: 0
78 oriTs: 0 77 oriTs: 0
79 78
80 export annotation results to: /tmp/tmptbkng6kx/job_working_directory/000/4/working 79 export annotation results to: /tmp/tmpmnqj1xog/job_working_directory/000/4/working
81 human readable TSV... 80 human readable TSV...
82 GFF3... 81 GFF3...
83 INSDC GenBank & EMBL... 82 INSDC GenBank & EMBL...
84 genome sequences... 83 genome sequences...
85 feature nucleotide sequences... 84 feature nucleotide sequences...
86 translated CDS sequences... 85 translated CDS sequences...
87 circular genome plot...
88 hypothetical TSV... 86 hypothetical TSV...
89 translated hypothetical CDS sequences... 87 translated hypothetical CDS sequences...
90 machine readable JSON... 88 machine readable JSON...
91 genome and annotation summary... 89 genome and annotation summary...
92 90
93 If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685 91 If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685
94 Annotation successfully finished in 0:01 [mm:ss]. 92 Annotation successfully finished in 0:00 [mm:ss].