view test-data/tabular_file/tabular_file_output.json @ 0:a157d29ef11d draft default tip

planemo upload commit 4b30072ce6fff8554976af6fb4fce92069d39a6e
author pimarin
date Mon, 15 May 2023 14:20:18 +0000
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[{"analysis_software_name": "tabular_file", "results": {"tabular_file": {"name": "report", "file_path": "test/data/dummy/tabular_file/report.tsv", "hid": "1234", "content": [{"#FILE": "/storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta", "SEQUENCE": "contig00002", "START": 142975, "END": 143985, "STRAND": "+", "GENE": "bopD", "COVERAGE": "1-1011/1011", "COVERAGE_MAP": "===============", "GAPS": "0/0", "%COVERAGE": 100.0, "%IDENTITY": 98.91, "DATABASE": "vfdb", "ACCESSION": "NP_814691", "PRODUCT": "(bopD)sugar-bindingtranscriptionalregulatorLacIfamily[BopD(VF0362)][EnterococcusfaecalisV583]", "RESISTANCE": null}, {"#FILE": "/storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta", "SEQUENCE": "contig00003", "START": 7884, "END": 11111, "STRAND": "-", "GENE": "fss3", "COVERAGE": "1-3228/3228", "COVERAGE_MAP": "===============", "GAPS": "0/0", "%COVERAGE": 100.0, "%IDENTITY": 99.38, "DATABASE": "vfdb", "ACCESSION": "NP_815578", "PRODUCT": "(fss3)EnterococcusfaecalissurfaceproteinFss3fibrinogenbindingprotein[Fibrinogenbindingprotein(AI273)][EnterococcusfaecalisV583]", "RESISTANCE": null}]}}}]