--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/recentrifuge/rcf_data.tsv	Mon May 15 14:20:18 2023 +0000
@@ -0,0 +1,296 @@
+Samples	/storage/scratch/piemari/60579059/recentrifuge/10_Enterococcus_faecalis_S17_L001	/storage/scratch/piemari/60579059/recentrifuge/10_Enterococcus_faecalis_S17_L001	/storage/scratch/piemari/60579059/recentrifuge/10_Enterococcus_faecalis_S17_L001	Details	Details
+Stats	count	unassigned	score	Rank	Name
+Id					
+1	1705098	8766	23.406576938256993	no_rank	root
+2	1696077	41771	23.395425082794883	superkingdom	Bacteria
+1224	656	8	2.5291006275765358	phylum	Proteobacteria
+1236	626	12	2.482047572064056	class	Gammaproteobacteria
+91347	614	1	2.457941868298954	order	Enterobacterales
+543	613	320	2.460424106929107	family	Enterobacteriaceae
+2890311	293	0	3.246096990938595	no_rank	Klebsiella/Raoultella group
+570	293	0	3.246096990938595	genus	Klebsiella
+573	37	37	0.8707595857425035	species	Klebsiella pneumoniae
+1463165	256	256	3.5894074752833425	species	Klebsiella quasipneumoniae
+28211	14	3	3.5108263106101574	class	Alphaproteobacteria
+204455	11	0	3.9118522954498163	order	Rhodobacterales
+31989	11	5	3.9118522954498163	family	Rhodobacteraceae
+2083206	6	0	5.003000134822521	genus	Tritonibacter
+379347	6	6	5.003000134822521	species	Tritonibacter mobilis
+68525	8	2	6.4392025411184886	subphylum	delta/epsilon subdivisions
+29547	6	0	6.491794757763988	class	Epsilonproteobacteria
+213849	6	6	6.491794757763988	order	Campylobacterales
+203691	8	0	2.670556919903863	phylum	Spirochaetes
+203692	8	0	2.670556919903863	class	Spirochaetia
+1643686	8	0	2.670556919903863	order	Brachyspirales
+143786	8	0	2.670556919903863	family	Brachyspiraceae
+29521	8	0	2.670556919903863	genus	Brachyspira
+52584	8	0	2.670556919903863	species	Brachyspira pilosicoli
+759914	8	8	2.670556919903863	strain	Brachyspira pilosicoli 95/1000
+1783257	9	1	5.666318593923775	no_rank	PVC group
+204428	8	0	6.1710253562749955	phylum	Chlamydiae
+204429	8	0	6.1710253562749955	class	Chlamydiia
+1963360	8	0	6.1710253562749955	order	Parachlamydiales
+92713	8	0	6.1710253562749955	family	Parachlamydiaceae
+83551	8	0	6.1710253562749955	genus	Parachlamydia
+83552	8	0	6.1710253562749955	species	Parachlamydia acanthamoebae
+765952	8	8	6.1710253562749955	strain	Parachlamydia acanthamoebae UV-7
+1783270	66	0	2.006752928257857	no_rank	FCB group
+68336	66	0	2.006752928257857	no_rank	Bacteroidetes/Chlorobi group
+976	66	0	2.006752928257857	phylum	Bacteroidota
+117743	16	0	4.41718651898131	class	Flavobacteriia
+200644	16	0	4.41718651898131	order	Flavobacteriales
+49546	10	10	5.956891819839705	family	Flavobacteriaceae
+2762318	6	0	1.8510110175506516	family	Weeksellaceae
+2782232	6	0	1.8510110175506516	no_rank	Chryseobacterium group
+59732	6	6	1.8510110175506516	genus	Chryseobacterium
+200643	50	0	1.2354141792263518	class	Bacteroidia
+171549	50	0	1.2354141792263518	order	Bacteroidales
+815	50	0	1.2354141792263518	family	Bacteroidaceae
+816	50	0	1.2354141792263518	genus	Bacteroides
+817	50	50	1.2354141792263518	species	Bacteroides fragilis
+1783272	1653567	1652	23.34001268644121	no_rank	Terrabacteria group
+1239	1651848	2786	23.34408417992166	phylum	Firmicutes
+91061	1648513	26463	23.367281250244677	class	Bacilli
+1385	1549	105	1.5310126165432292	order	Bacillales
+90964	933	3	1.6488807818855296	family	Staphylococcaceae
+1279	922	364	1.6529169672137187	genus	Staphylococcus
+1280	172	172	4.134921158621555	species	Staphylococcus aureus
+1283	9	9	1.1011853849280868	species	Staphylococcus haemolyticus
+29382	169	169	0.8554142297734083	species	Staphylococcus cohnii
+2815305	208	0	0.9949576979684763	species_group	Staphylococcus intermedius group
+283734	208	208	0.9949576979684763	species	Staphylococcus pseudintermedius
+2803850	8	0	0.793093163911496	genus	Mammaliicoccus
+1296	8	8	0.793093163911496	species	Mammaliicoccus sciuri
+186817	455	134	1.2032272261636583	family	Bacillaceae
+1386	97	13	1.0549176203970638	genus	Bacillus
+86661	41	9	1.1850461843452467	species_group	Bacillus cereus group
+1392	13	13	1.1096346346273416	species	Bacillus anthracis
+1396	8	8	1.0777632709036333	species	Bacillus cereus
+1428	11	11	1.6198538082960143	species	Bacillus thuringiensis
+185979	8	8	0.8301699316132318	no_rank	unclassified Bacillus (in: Bacteria)
+653685	35	9	1.028818211280399	species_group	Bacillus subtilis group
+1938374	26	2	0.9773258338876348	species_subgroup	Bacillus amyloliquefaciens group
+1390	12	12	1.0423283671465575	species	Bacillus amyloliquefaciens
+492670	12	12	0.8648197655965195	species	Bacillus velezensis
+150247	21	1	3.6032022418134697	genus	Anoxybacillus
+247480	14	14	4.178868577006367	species	Anoxybacillus caldiproteolyticus
+2639704	6	0	2.672897239210963	no_rank	unclassified Anoxybacillus
+1636720	6	6	2.672897239210963	species	Anoxybacillus sp. PDR2
+2837504	203	1	0.6082599491575995	genus	Heyndrickxia
+38875	195	195	0.4574625508975431	species	Heyndrickxia oleronia
+1476025	7	7	4.842030537629395	species	Heyndrickxia vini
+186818	10	4	0.8776692512548797	family	Planococcaceae
+1372	6	6	1.183068030563869	genus	Planococcus
+186820	14	2	0.8690075588200579	family	Listeriaceae
+1637	12	12	0.9052546679909343	genus	Listeria
+186822	17	0	1.2111399791152304	family	Paenibacillaceae
+44249	17	17	1.2111399791152304	genus	Paenibacillus
+186823	6	6	0.7696180525672581	family	Alicyclobacillaceae
+539002	9	9	0.6676970796195962	no_rank	Bacillales incertae sedis
+186826	1620501	13929	23.438078410183238	order	Lactobacillales
+1300	6499	343	8.950766344236197	family	Streptococcaceae
+1301	5588	912	9.324347536844721	genus	Streptococcus
+1307	16	16	1.5477643732288435	species	Streptococcus suis
+1308	730	730	3.96659053092353	species	Streptococcus thermophilus
+1311	109	109	2.1198590513226216	species	Streptococcus agalactiae
+1313	43	43	1.30377206625794	species	Streptococcus pneumoniae
+1314	13	13	1.1410197570750837	species	Streptococcus pyogenes
+1348	15	15	4.238633601332688	species	Streptococcus parauberis
+45634	304	0	4.466371036054079	species	Streptococcus cristatus
+1302863	304	304	4.466371036054079	strain	Streptococcus cristatus AS 1.3089
+119603	213	4	5.907772289285088	species_group	Streptococcus dysgalactiae group
+1336	209	0	6.002867303618146	species	Streptococcus equi
+40041	209	209	6.002867303618146	subspecies	Streptococcus equi subsp. zooepidemicus
+315405	3221	1	12.057447943466315	species	Streptococcus gallolyticus
+53354	3220	0	12.06105003425735	subspecies	Streptococcus gallolyticus subsp. gallolyticus
+990317	3220	3220	12.06105003425735	strain	Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
+2608887	12	12	4.040673378780668	no_rank	unclassified Streptococcus
+1357	568	16	1.8038867754253172	genus	Lactococcus
+1358	85	17	2.9759019163062628	species	Lactococcus lactis
+1360	68	9	3.1673295430623827	subspecies	Lactococcus lactis subsp. lactis
+1046624	59	59	3.3693793853069898	strain	Lactococcus lactis subsp. lactis IO-1
+1359	97	97	2.8685547465494197	species	Lactococcus cremoris
+1363	213	213	1.0441656096319267	species	Lactococcus garvieae
+1366	129	129	1.528012433305227	species	Lactococcus raffinolactis
+2643510	28	1	2.0332664205808824	no_rank	unclassified Lactococcus
+2816910	27	27	2.091019486184282	species	Lactococcus sp. LG1267
+33958	153	39	1.2333772766877353	family	Lactobacillaceae
+1253	9	9	1.2609888230893362	genus	Pediococcus
+1578	28	17	1.0157277094629367	genus	Lactobacillus
+147802	11	11	1.2357711002890166	species	Lactobacillus iners
+46255	6	6	0.7397900915153407	genus	Weissella
+2742598	9	9	1.419764724364403	genus	Limosilactobacillus
+2759736	6	6	1.6054278158689648	genus	Lacticaseibacillus
+2767842	10	0	1.2858255140682764	genus	Lactiplantibacillus
+1590	10	10	1.2858255140682764	species	Lactiplantibacillus plantarum
+2767885	17	4	1.7265763187666388	genus	Latilactobacillus
+1599	13	13	1.5066888443924613	species	Latilactobacillus sakei
+2767886	9	0	1.398328241873101	genus	Levilactobacillus
+1580	9	9	1.398328241873101	species	Levilactobacillus brevis
+2767887	14	7	0.598606789402397	genus	Ligilactobacillus
+1624	7	7	0.7636517432199416	species	Ligilactobacillus salivarius
+2767889	6	6	1.2492772274230424	genus	Loigolactobacillus
+81852	1599685	921	23.559535176620216	family	Enterococcaceae
+1350	1598695	64275	23.566991570231448	genus	Enterococcus
+1351	1531613	1510052	23.668248263678578	species	Enterococcus faecalis
+226185	21	21	0.38435018791238007	strain	Enterococcus faecalis V583
+474186	33	33	0.40064354059738017	strain	Enterococcus faecalis OG1RF
+565651	1670	1670	2.8545355118080313	strain	Enterococcus faecalis ARO1/DG
+699186	2753	2753	3.57789453794821	strain	Enterococcus faecalis R712
+1157365	24	24	0.9432657281093839	strain	Enterococcus faecalis EnGen0107
+1201292	2351	2351	8.186838413433843	strain	Enterococcus faecalis ATCC 29212
+1206105	1218	1218	2.0340956240102512	strain	Enterococcus faecalis D32
+1287066	13491	13491	3.6306104825402294	strain	Enterococcus faecalis DENG1
+1352	1782	1776	2.591998705389451	species	Enterococcus faecium
+1158600	6	6	1.4376070661915603	strain	Enterococcus faecium ATCC 8459 = NRRL B-2354
+1353	6	6	1.3396929056537363	species	Enterococcus gallinarum
+1354	129	129	1.2135478557261825	species	Enterococcus hirae
+33945	176	176	3.4731254588207925	species	Enterococcus avium
+37734	117	117	3.6337486681979128	species	Enterococcus casseliflavus
+44008	163	163	1.2180773813893313	species	Enterococcus cecorum
+53345	183	183	4.158614968772894	species	Enterococcus durans
+53346	18	18	3.7767835297172416	species	Enterococcus mundtii
+118060	36	36	2.495243825038598	species	Enterococcus rotai
+160453	33	33	3.5229405344436837	species	Enterococcus gilvus
+1805431	8	8	2.580826752808647	species	Enterococcus saigonensis
+2005703	14	14	7.807370084132559	species	Enterococcus wangshanyuanii
+2608891	142	11	1.764832744365358	no_rank	unclassified Enterococcus
+2582830	131	131	1.804257856185198	species	Enterococcus sp. M190262
+2737	50	12	1.5892104699251237	genus	Vagococcus
+218144	11	11	2.7248547482928465	species	Vagococcus carniphilus
+633807	21	21	1.4273307820801826	species	Vagococcus penaei
+2714947	6	6	1.6019980684696447	species	Vagococcus hydrophili
+33969	9	0	1.4531669487922143	genus	Melissococcus
+33970	9	9	1.4531669487922143	species	Melissococcus plutonius
+51668	10	10	1.221592140263402	genus	Tetragenococcus
+186827	24	1	1.4419914958056321	family	Aerococcaceae
+1375	17	7	1.6149265102205854	genus	Aerococcus
+1377	10	10	1.5748583749325622	species	Aerococcus viridans
+2689587	6	0	0.8603355588458771	genus	Suicoccus
+2036206	6	6	0.8603355588458771	species	Suicoccus acidiformans
+186828	211	2	2.818108437721708	family	Carnobacteriaceae
+2747	197	89	2.8269564507766582	genus	Carnobacterium
+2751	21	21	5.768927251679546	species	Carnobacterium maltaromaticum
+147709	35	0	0.8868865283829857	species	Carnobacterium inhibens
+1266845	35	35	0.8868865283829857	subspecies	Carnobacterium inhibens subsp. gilichinskyi
+257487	52	0	1.5168016352448308	no_rank	unclassified Carnobacterium
+208596	52	52	1.5168016352448308	species	Carnobacterium sp. 17-4
+1470540	12	12	2.9328747714756394	genus	Jeotgalibaca
+186801	420	9	1.7953874695058052	class	Clostridia
+186802	411	41	1.75553519563304	order	Eubacteriales
+31979	44	0	2.0738127026600917	family	Clostridiaceae
+1485	44	9	2.0738127026600917	genus	Clostridium
+1491	6	6	5.854468629326717	species	Clostridium botulinum
+1502	29	1	1.5883848967108667	species	Clostridium perfringens
+883064	28	28	1.5400709119295324	strain	Clostridium perfringens F262
+186803	19	10	5.110117753725923	family	Lachnospiraceae
+207244	9	0	9.481396423792944	genus	Anaerostipes
+649756	9	9	9.481396423792944	species	Anaerostipes hadrus
+186804	307	1	1.615475527020151	family	Peptostreptococcaceae
+1870884	306	0	1.620142878684913	genus	Clostridioides
+1496	306	306	1.620142878684913	species	Clostridioides difficile
+526524	40	0	3.077947620267509	class	Erysipelotrichia
+526525	40	0	3.077947620267509	order	Erysipelotrichales
+128827	40	40	3.077947620267509	family	Erysipelotrichaceae
+1737404	89	0	6.446806729756411	class	Tissierellia
+1737405	89	0	6.446806729756411	order	Tissierellales
+1570339	89	0	6.446806729756411	family	Peptoniphilaceae
+162289	89	1	6.446806729756411	genus	Peptoniphilus
+54006	88	88	6.502217253636913	species	Peptoniphilus ivorii
+201174	50	0	1.8529176000849532	phylum	Actinobacteria
+1760	50	10	1.8529176000849532	class	Actinomycetia
+85006	7	7	6.253699226891209	order	Micrococcales
+85011	33	0	0.7209126998313955	order	Streptomycetales
+2062	33	0	0.7209126998313955	family	Streptomycetaceae
+1883	33	5	0.7209126998313955	genus	Streptomyces
+2593676	28	0	0.781301999103657	no_rank	unclassified Streptomyces
+2099583	22	22	0.6282086319176973	species	Streptomyces sp. ICC1
+2099584	6	6	1.3426443454521761	species	Streptomyces sp. ICC4
+544448	17	1	1.7949411008239513	phylum	Tenericutes
+31969	7	0	1.295527684915119	class	Mollicutes
+2085	7	0	1.295527684915119	order	Mycoplasmatales
+2092	7	1	1.295527684915119	family	Mycoplasmataceae
+2767358	6	6	1.4264149521288634	genus	Mycoplasmopsis
+2790996	9	1	2.2705782121667033	order	Mycoplasmoidales
+2895623	8	0	1.396993081280134	family	Metamycoplasmataceae
+2895509	8	0	1.396993081280134	genus	Metamycoplasma
+2098	8	8	1.396993081280134	species	Metamycoplasma hominis
+2157	31	0	4.238254159773117	superkingdom	Archaea
+28890	7	0	2.6483733912147787	phylum	Euryarchaeota
+2283794	7	0	2.6483733912147787	no_rank	Methanomada group
+183925	7	0	2.6483733912147787	class	Methanobacteria
+2158	7	0	2.6483733912147787	order	Methanobacteriales
+2159	7	0	2.6483733912147787	family	Methanobacteriaceae
+2172	7	1	2.6483733912147787	genus	Methanobrevibacter
+83816	6	0	2.9956069978485034	species	Methanobrevibacter ruminantium
+634498	6	6	2.9956069978485034	strain	Methanobrevibacter ruminantium M1
+1783275	24	2	4.701969383935966	no_rank	TACK group
+651137	22	0	4.833030004650398	phylum	Thaumarchaeota
+31932	22	0	4.833030004650398	order	Nitrosopumilales
+338190	22	0	4.833030004650398	family	Nitrosopumilaceae
+338191	22	0	4.833030004650398	genus	Nitrosopumilus
+1580092	22	22	4.833030004650398	species	Nitrosopumilus adriaticus
+2759	158	0	3.7577410515006657	superkingdom	Eukaryota
+33154	158	0	3.7577410515006657	no_rank	Opisthokonta
+4751	25	0	1.1301603777565976	kingdom	Fungi
+451864	25	0	1.1301603777565976	subkingdom	Dikarya
+4890	25	0	1.1301603777565976	phylum	Ascomycota
+716545	25	0	1.1301603777565976	no_rank	saccharomyceta
+147537	25	0	1.1301603777565976	subphylum	Saccharomycotina
+4891	25	0	1.1301603777565976	class	Saccharomycetes
+4892	25	0	1.1301603777565976	order	Saccharomycetales
+115784	10	0	1.3132361338061045	family	Phaffomycetaceae
+460517	10	0	1.3132361338061045	genus	Komagataella
+460519	10	0	1.3132361338061045	species	Komagataella phaffii
+644223	10	10	1.3132361338061045	strain	Komagataella phaffii GS115
+2916678	15	0	1.008109873723593	no_rank	CUG-Ser1 clade
+766764	15	0	1.008109873723593	family	Debaryomycetaceae
+1535325	15	0	1.008109873723593	no_rank	Candida/Lodderomyces clade
+5475	15	0	1.008109873723593	genus	Candida
+42374	15	0	1.008109873723593	species	Candida dubliniensis
+573826	15	15	1.008109873723593	strain	Candida dubliniensis CD36
+33208	133	0	4.251647193181881	kingdom	Metazoa
+6072	133	0	4.251647193181881	no_rank	Eumetazoa
+33213	133	0	4.251647193181881	no_rank	Bilateria
+33511	133	0	4.251647193181881	no_rank	Deuterostomia
+7711	133	0	4.251647193181881	phylum	Chordata
+89593	133	0	4.251647193181881	subphylum	Craniata
+7742	133	0	4.251647193181881	no_rank	Vertebrata
+7776	133	0	4.251647193181881	no_rank	Gnathostomata
+117570	133	0	4.251647193181881	no_rank	Teleostomi
+117571	133	0	4.251647193181881	no_rank	Euteleostomi
+8287	133	0	4.251647193181881	superclass	Sarcopterygii
+1338369	133	0	4.251647193181881	no_rank	Dipnotetrapodomorpha
+32523	133	0	4.251647193181881	no_rank	Tetrapoda
+32524	133	0	4.251647193181881	no_rank	Amniota
+40674	133	0	4.251647193181881	class	Mammalia
+32525	133	0	4.251647193181881	no_rank	Theria
+9347	133	0	4.251647193181881	no_rank	Eutheria
+1437010	133	0	4.251647193181881	no_rank	Boreoeutheria
+314146	133	0	4.251647193181881	superorder	Euarchontoglires
+9443	133	0	4.251647193181881	order	Primates
+376913	133	0	4.251647193181881	suborder	Haplorrhini
+314293	133	0	4.251647193181881	infraorder	Simiiformes
+9526	133	0	4.251647193181881	parvorder	Catarrhini
+314295	133	0	4.251647193181881	superfamily	Hominoidea
+9604	133	0	4.251647193181881	family	Hominidae
+207598	133	0	4.251647193181881	subfamily	Homininae
+9605	133	0	4.251647193181881	genus	Homo
+9606	133	133	4.251647193181881	species	Homo sapiens
+10239	66	0	4.761562706518553	superkingdom	Viruses
+2731341	41	0	4.775296347886017	no_rank	Duplodnaviria
+2731360	41	0	4.775296347886017	kingdom	Heunggongvirae
+2731618	41	0	4.775296347886017	phylum	Uroviricota
+2731619	41	0	4.775296347886017	class	Caudoviricetes
+10699	41	0	4.775296347886017	family	Siphoviridae
+196894	41	0	4.775296347886017	no_rank	unclassified Siphoviridae
+1747326	41	41	4.775296347886017	species	Enterococcus phage vB_EfaS_IME197
+2732004	25	0	4.7390395346759115	no_rank	Varidnaviria
+2732005	25	0	4.7390395346759115	kingdom	Bamfordvirae
+2732007	25	0	4.7390395346759115	phylum	Nucleocytoviricota
+2732523	25	0	4.7390395346759115	class	Megaviricetes
+2732554	25	0	4.7390395346759115	order	Imitervirales
+549779	25	0	4.7390395346759115	family	Mimiviridae
+985780	25	0	4.7390395346759115	no_rank	unclassified Mimiviridae
+985782	25	0	4.7390395346759115	species	Moumouvirus
+1269028	25	25	4.7390395346759115	no_rank	Acanthamoeba polyphaga moumouvirus