Mercurial > repos > pimarin > abromicsextractor
comparison test-data/fastp/fastp_report.json @ 0:a157d29ef11d draft default tip
planemo upload commit 4b30072ce6fff8554976af6fb4fce92069d39a6e
| author | pimarin |
|---|---|
| date | Mon, 15 May 2023 14:20:18 +0000 |
| parents | |
| children |
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| -1:000000000000 | 0:a157d29ef11d |
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| 1 {"summary": { | |
| 2 "fastp_version": "0.23.2", | |
| 3 "sequencing": "paired end (301 cycles + 301 cycles)", | |
| 4 "before_filtering": { | |
| 5 "total_reads": 3489582, | |
| 6 "total_bases": 705053822, | |
| 7 "q20_bases": 672633294, | |
| 8 "q30_bases": 625189177, | |
| 9 "q20_rate": 0.954017, | |
| 10 "q30_rate": 0.886725, | |
| 11 "read1_mean_length": 201, | |
| 12 "read2_mean_length": 202, | |
| 13 "gc_content": 0.374995 | |
| 14 }} | |
| 15 } |
