Mercurial > repos > pimarin > abromics_extractor_summarize

annotate test-data/bandage/bandage_info.txt @ 2:5a7db3d820c5 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 0a5fc6ee1a42b0c1c413de143a01559cb491c2e5-dirty
author pimarin
date Wed, 05 Jul 2023 14:22:57 +0000
parents 35704a6837a7
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
1 Node count: 222
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
2 Edge count: 299
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
3 Smallest edge overlap (bp): 127
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
4 Largest edge overlap (bp): 127
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
5 Total length (bp): 3042326
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
6 Total length no overlaps (bp): 3014132
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
7 Dead ends: 0
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
8 Percentage dead ends: 0%
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
9 Connected components: 2
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
10 Largest component (bp): 3042198
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
11 Total length orphaned nodes (bp): 3042198
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
12 N50 (bp): 79920
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
13 Shortest node (bp): 128
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
14 Lower quartile node (bp): 151
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
15 Median node (bp): 256
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
16 Upper quartile node (bp): 7566
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
17 Longest node (bp): 239204
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
18 Median depth: 22.997
35704a6837a7 planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
pimarin
parents:
diff changeset
19 Estimated sequence length (bp): 3234717