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comparison tools/protein_analysis/signalp3.py @ 34:7a2e20baacee draft default tip

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"v0.2.13 - Python 3 fix for raising StopIteration"
author peterjc
date Thu, 17 Jun 2021 17:58:23 +0000
parents 20da7f48b56f
children
comparison
equal deleted inserted replaced
33:4fcc441269f5 34:7a2e20baacee
65 65
66 FASTA_CHUNK = 500 66 FASTA_CHUNK = 500
67 MAX_LEN = 6000 # Found by trial and error 67 MAX_LEN = 6000 # Found by trial and error
68 68
69 if "-v" in sys.argv or "--version" in sys.argv: 69 if "-v" in sys.argv or "--version" in sys.argv:
70 print("SignalP Galaxy wrapper version 0.0.19") 70 print("SignalP Galaxy wrapper version 0.0.20")
71 sys.exit(os.system("signalp -version")) 71 sys.exit(os.system("signalp -version"))
72 72
73 if len(sys.argv) not in [6, 8]: 73 if len(sys.argv) not in [6, 8]:
74 sys.exit( 74 sys.exit(
75 "Require five (or 7) arguments, organism, truncate, threads, " 75 "Require five (or 7) arguments, organism, truncate, threads, "