Mercurial > repos > peterjc > tmhmm_and_signalp

comparison tools/protein_analysis/psortb.xml @ 17:af3174637834 draft

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Uploaded v0.2.5 preview 1, adding links to Tool Shed entry
author peterjc
date Thu, 02 May 2013 13:32:58 -0400
parents 3d74c1176d67
children 4cd848c5590b
comparison
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16:1d5486a02bc4 17:af3174637834
1 <tool id="Psortb" name="psortb" version="0.0.1"> 1 <tool id="Psortb" name="psortb" version="0.0.2">
2 <description>Determines sub-cellular localisation of bacterial/archaeal protein sequences</description> 2 <description>Determines sub-cellular localisation of bacterial/archaeal protein sequences</description>
3 <!-- If job splitting is enabled, break up the query file into parts --> 3 <!-- If job splitting is enabled, break up the query file into parts -->
4 <!-- Using 2000 chunks meaning 4 threads doing 500 each is ideal --> 4 <!-- Using 2000 chunks meaning 4 threads doing 500 each is ideal -->
5 <parallelism method="basic" split_inputs="fasta_file" split_mode="to_size" split_size="2000" merge_outputs="tabular_file"></parallelism> 5 <parallelism method="basic" split_inputs="fasta_file" split_mode="to_size" split_size="2000" merge_outputs="tabular_file"></parallelism>
6 <version_command interpreter="python">psortb.py --version</version_command> 6 <version_command interpreter="python">psortb.py --version</version_command>
83 prokaryotes, Bioinformatics 26(13):1608-1615 83 prokaryotes, Bioinformatics 26(13):1608-1615
84 http://dx.doi.org/10.1093/bioinformatics/btq249 84 http://dx.doi.org/10.1093/bioinformatics/btq249
85 85
86 http://www.psort.org/documentation/index.html 86 http://www.psort.org/documentation/index.html
87 87
88 This wrapper is available to install into other Galaxy Instances via the Galaxy
89 Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/tmhmm_and_signalp
88 </help> 90 </help>
89 </tool> 91 </tool>