Mercurial > repos > peterjc > tmhmm_and_signalp

comparison tools/protein_analysis/promoter2.xml @ 20:a538e182fab3 draft

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Uploaded v0.2.5 preview 4, adding Cock et al. 2003 citation information.
author peterjc
date Tue, 10 Sep 2013 08:55:19 -0400
parents 4cd848c5590b
children 90e3d02f8013
comparison
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19:4cd848c5590b 20:a538e182fab3
65 65
66 Internally the input FASTA file is divided into parts (to allow multiple processors to be used), and the raw output is reformatted into this tabular layout suitable for downstream analysis within Galaxy. 66 Internally the input FASTA file is divided into parts (to allow multiple processors to be used), and the raw output is reformatted into this tabular layout suitable for downstream analysis within Galaxy.
67 67
68 **References** 68 **References**
69 69
70 Knudsen. 70 If you use this Galaxy tool in work leading to a scientific publication please
71 cite the following papers:
72
73 Peter Cock, Bjoern Gruening, Konrad Paszkiewicz and Leighton Pritchard (2013).
74 Galaxy tools and workflows for sequence analysis with applications
75 in molecular plant pathology. PeerJ 1:e167
76 http://dx.doi.org/10.7717/peerj.167
77
78 Knudsen (1999).
71 Promoter2.0: for the recognition of PolII promoter sequences. 79 Promoter2.0: for the recognition of PolII promoter sequences.
72 Bioinformatics, 15:356-61, 1999. 80 Bioinformatics, 15:356-61.
73 http://dx.doi.org/10.1093/bioinformatics/15.5.356 81 http://dx.doi.org/10.1093/bioinformatics/15.5.356
74 82
75 http://www.cbs.dtu.dk/services/Promoter/output.php 83 See also http://www.cbs.dtu.dk/services/Promoter/output.php
76 84
77 This wrapper is available to install into other Galaxy Instances via the Galaxy 85 This wrapper is available to install into other Galaxy Instances via the Galaxy
78 Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/tmhmm_and_signalp 86 Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/tmhmm_and_signalp
79 </help> 87 </help>
80 </tool> 88 </tool>