Mercurial > repos > peterjc > tmhmm_and_signalp

comparison tools/protein_analysis/README.rst @ 28:22e71e53f534 draft

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Capture version of promoter2
author peterjc
date Tue, 01 Sep 2015 08:24:49 -0400
parents 9e36a1b9302d
children 3cb02adf4326
comparison
equal deleted inserted replaced
27:9e36a1b9302d 28:22e71e53f534
175 - Updated the ``suite_config.xml`` file (overdue). 175 - Updated the ``suite_config.xml`` file (overdue).
176 - Tool definition now embeds citation information. 176 - Tool definition now embeds citation information.
177 v0.2.7 - Style cleanup in Python scripts. 177 v0.2.7 - Style cleanup in Python scripts.
178 v0.2.8 - Reorder XML elements (internal change only). 178 v0.2.8 - Reorder XML elements (internal change only).
179 - Planemo for Tool Shed upload (``.shed.yml``, internal change only). 179 - Planemo for Tool Shed upload (``.shed.yml``, internal change only).
180 - Record version of Promoter 2 via ``<version_command>``.
180 ======= ====================================================================== 181 ======= ======================================================================
181 182
182 183
183 Developers 184 Developers
184 ========== 185 ==========
193 194
194 For pushing a release to the test or main "Galaxy Tool Shed", use the following 195 For pushing a release to the test or main "Galaxy Tool Shed", use the following
195 Planemo commands (which requires you have set your Tool Shed access details in 196 Planemo commands (which requires you have set your Tool Shed access details in
196 ``~/.planemo.yml`` and that you have access rights on the Tool Shed):: 197 ``~/.planemo.yml`` and that you have access rights on the Tool Shed)::
197 198
198 $ planemo shed_update --shed_target testtoolshed --check_diff ~/repositories/pico_galaxy/tools/protein_analysis/ 199 $ planemo shed_update -t testtoolshed --check_diff ~/repositories/pico_galaxy/tools/protein_analysis/
199 ... 200 ...
200 201
201 or:: 202 or::
202 203
203 $ planemo shed_update --shed_target toolshed --check_diff ~/repositories/pico_galaxy/tools/protein_analysis/ 204 $ planemo shed_update -t toolshed --check_diff ~/repositories/pico_galaxy/tools/protein_analysis/
204 ... 205 ...
205 206
206 To just build and check the tar ball, use:: 207 To just build and check the tar ball, use::
207 208
208 $ planemo shed_upload --tar_only ~/repositories/pico_galaxy/tools/protein_analysis/ 209 $ planemo shed_upload --tar_only ~/repositories/pico_galaxy/tools/protein_analysis/