Mercurial > repos > peterjc > tmhmm_and_signalp
comparison tools/protein_analysis/README.rst @ 28:22e71e53f534 draft
Capture version of promoter2
author | peterjc |
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date | Tue, 01 Sep 2015 08:24:49 -0400 |
parents | 9e36a1b9302d |
children | 3cb02adf4326 |
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27:9e36a1b9302d | 28:22e71e53f534 |
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175 - Updated the ``suite_config.xml`` file (overdue). | 175 - Updated the ``suite_config.xml`` file (overdue). |
176 - Tool definition now embeds citation information. | 176 - Tool definition now embeds citation information. |
177 v0.2.7 - Style cleanup in Python scripts. | 177 v0.2.7 - Style cleanup in Python scripts. |
178 v0.2.8 - Reorder XML elements (internal change only). | 178 v0.2.8 - Reorder XML elements (internal change only). |
179 - Planemo for Tool Shed upload (``.shed.yml``, internal change only). | 179 - Planemo for Tool Shed upload (``.shed.yml``, internal change only). |
180 - Record version of Promoter 2 via ``<version_command>``. | |
180 ======= ====================================================================== | 181 ======= ====================================================================== |
181 | 182 |
182 | 183 |
183 Developers | 184 Developers |
184 ========== | 185 ========== |
193 | 194 |
194 For pushing a release to the test or main "Galaxy Tool Shed", use the following | 195 For pushing a release to the test or main "Galaxy Tool Shed", use the following |
195 Planemo commands (which requires you have set your Tool Shed access details in | 196 Planemo commands (which requires you have set your Tool Shed access details in |
196 ``~/.planemo.yml`` and that you have access rights on the Tool Shed):: | 197 ``~/.planemo.yml`` and that you have access rights on the Tool Shed):: |
197 | 198 |
198 $ planemo shed_update --shed_target testtoolshed --check_diff ~/repositories/pico_galaxy/tools/protein_analysis/ | 199 $ planemo shed_update -t testtoolshed --check_diff ~/repositories/pico_galaxy/tools/protein_analysis/ |
199 ... | 200 ... |
200 | 201 |
201 or:: | 202 or:: |
202 | 203 |
203 $ planemo shed_update --shed_target toolshed --check_diff ~/repositories/pico_galaxy/tools/protein_analysis/ | 204 $ planemo shed_update -t toolshed --check_diff ~/repositories/pico_galaxy/tools/protein_analysis/ |
204 ... | 205 ... |
205 | 206 |
206 To just build and check the tar ball, use:: | 207 To just build and check the tar ball, use:: |
207 | 208 |
208 $ planemo shed_upload --tar_only ~/repositories/pico_galaxy/tools/protein_analysis/ | 209 $ planemo shed_upload --tar_only ~/repositories/pico_galaxy/tools/protein_analysis/ |