--- a/tools/primers/seq_primer_clip.txt	Mon Apr 29 06:09:15 2013 -0400
+++ b/tools/primers/seq_primer_clip.txt	Tue Apr 30 11:04:13 2013 -0400
@@ -12,25 +12,14 @@
 * seq_primer_clip.xml (the Galaxy tool definition)
 
 The suggested location is a new tools/primers folder. You will also need to
-modify the tools_conf.xml file to tell Galaxy to offer the tool and also do
-this to tools_conf.xml.sample in order to run the tests:
+modify the tools_conf.xml file to tell Galaxy to offer the tool:
 
 <tool file="primers/seq_primer_clip.xml" />
 
-There are optionally some example files required to run the functional tests,
-put these in the test-data/primers folder.
+If you wish to run the unit tests, also add this to tools_conf.xml.sample
+and move/copy the test-data files under Galaxy's test-data folder. Then:
 
-test-data/primers/dop_primers.fasta
-test-data/primers/MID4_GLZRM4E04_rnd30.fasta
-test-data/primers/MID4_GLZRM4E04_rnd30.fastqsanger
-test-data/primers/MID4_GLZRM4E04_rnd30.sff
-test-data/primers/MID4_GLZRM4E04_rnd30_fclip.fasta
-test-data/primers/MID4_GLZRM4E04_rnd30_fclip.fastqsanger
-test-data/primers/MID4_GLZRM4E04_rnd30_fclip.sff
-
-You should then be able to run the tests with:
-
-sh run_functional_tests.sh -id seq_primer_clip
+$ ./run_functional_tests.sh -id seq_primer_clip
 
 You will also need to install Biopython 1.54 or later. That's it.
 
@@ -47,6 +36,7 @@
 v0.0.7 - Added error check for bad filename arguments
 v0.0.8 - Record version of Python script when run from Galaxy.
        - Check for errors using Python script's return code.
+v0.0.9 - Moved test data to workaround Galaxy Tool Shed limititation.
 
 
 Developers
@@ -61,7 +51,7 @@
 For making the "Galaxy Tool Shed" http://toolshed.g2.bx.psu.edu/ tarball use
 the following command from the Galaxy root folder:
 
-$ tar -czf seq_primer_clip.tar.gz tools/primers/seq_primer_clip.* test-data/primers/*
+$ tar -czf seq_primer_clip.tar.gz tools/primers/seq_primer_clip.* test-data/dop_primers.fasta test-data/MID4_GLZRM4E04_rnd30*
 
 Check this worked:
 
@@ -69,16 +59,16 @@
 tools/primers/seq_primer_clip.py
 tools/primers/seq_primer_clip.txt
 tools/primers/seq_primer_clip.xml
-test-data/primers/dop_primers.fasta
-test-data/primers/MID4_GLZRM4E04_rnd30.fasta
-test-data/primers/MID4_GLZRM4E04_rnd30.fastqsanger
-test-data/primers/MID4_GLZRM4E04_rnd30_fclip.fasta
-test-data/primers/MID4_GLZRM4E04_rnd30_fclip.fastqsanger
-test-data/primers/MID4_GLZRM4E04_rnd30_fclip.sff
-test-data/primers/MID4_GLZRM4E04_rnd30_frclip.fasta
-test-data/primers/MID4_GLZRM4E04_rnd30_frclip.fastqsanger
-test-data/primers/MID4_GLZRM4E04_rnd30_frclip.sff
-test-data/primers/MID4_GLZRM4E04_rnd30.sff
+test-data/dop_primers.fasta
+test-data/MID4_GLZRM4E04_rnd30.fasta
+test-data/MID4_GLZRM4E04_rnd30.fastqsanger
+test-data/MID4_GLZRM4E04_rnd30_fclip.fasta
+test-data/MID4_GLZRM4E04_rnd30_fclip.fastqsanger
+test-data/MID4_GLZRM4E04_rnd30_fclip.sff
+test-data/MID4_GLZRM4E04_rnd30_frclip.fasta
+test-data/MID4_GLZRM4E04_rnd30_frclip.fastqsanger
+test-data/MID4_GLZRM4E04_rnd30_frclip.sff
+test-data/MID4_GLZRM4E04_rnd30.sff
 
 
 Licence (MIT/BSD style)