Mercurial > repos > peterjc > rxlr_venn_workflow

comparison README.rst @ 11:de29af5da85e draft

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Uploaded v0.0.1l, fixed typo in README file
author peterjc
date Tue, 20 Aug 2013 06:53:57 -0400
parents a24a1614ef11
children 923fa2577564
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10:a24a1614ef11 11:de29af5da85e
17 removing the gzip compression to give you the FASTA protein file which 17 removing the gzip compression to give you the FASTA protein file which
18 has 19,805 protein sequences. The expected results: 18 has 19,805 protein sequences. The expected results:
19 19
20 * 89 RXLRs using Whisson et al. (2007) 20 * 89 RXLRs using Whisson et al. (2007)
21 * 124 RXLRs using Win et al. (2007) 21 * 124 RXLRs using Win et al. (2007)
22 * 162 RXLRs using Bhattacharjee et al. (006) 22 * 162 RXLRs using Bhattacharjee et al. (2006)
23 23
24 Of these, only 79 sequences pass all three of the RXLR prediction tools, 24 Of these, only 79 sequences pass all three of the RXLR prediction tools,
25 while 19643 have no RXLR matches at all. 25 while 19643 have no RXLR matches at all.
26 26
27 .. image:: https://raw.github.com/peterjc/picobio/master/galaxy_workflows/rxlr_venn_workflow/Phyca11_example_output.png 27 .. image:: https://raw.github.com/peterjc/picobio/master/galaxy_workflows/rxlr_venn_workflow/Phyca11_example_output.png