Mercurial > repos > peterjc > ncbi_blast_plus
diff test-data/blastx_rhodopsin_vs_four_human.xml @ 3:cf4903f5c81f draft
Uploaded v0.0.17
author | peterjc |
---|---|
date | Wed, 17 Apr 2013 09:45:28 -0400 |
parents | b04f55ab182c |
children | 5ec998a3530c |
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--- a/test-data/blastx_rhodopsin_vs_four_human.xml Wed Apr 17 09:44:44 2013 -0400 +++ b/test-data/blastx_rhodopsin_vs_four_human.xml Wed Apr 17 09:45:28 2013 -0400 @@ -1,8 +1,8 @@ <?xml version="1.0"?> -<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "NCBI_BlastOutput.dtd"> +<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> <BlastOutput> <BlastOutput_program>blastx</BlastOutput_program> - <BlastOutput_version>BLASTX 2.2.25+</BlastOutput_version> + <BlastOutput_version>BLASTX 2.2.26+</BlastOutput_version> <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> <BlastOutput_db></BlastOutput_db> <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> @@ -90,7 +90,7 @@ <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> - <Hsp_bit-score>662.143908370966</Hsp_bit-score> + <Hsp_bit-score>662.144</Hsp_bit-score> <Hsp_score>1707</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> @@ -194,9 +194,9 @@ <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> - <Hsp_bit-score>575.088804213644</Hsp_bit-score> + <Hsp_bit-score>575.089</Hsp_bit-score> <Hsp_score>1481</Hsp_score> - <Hsp_evalue>1.31349806431671e-168</Hsp_evalue> + <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>42</Hsp_query-from> <Hsp_query-to>1037</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> @@ -298,9 +298,9 @@ <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> - <Hsp_bit-score>224.171990552935</Hsp_bit-score> + <Hsp_bit-score>224.172</Hsp_bit-score> <Hsp_score>570</Hsp_score> - <Hsp_evalue>1.57574304751949e-62</Hsp_evalue> + <Hsp_evalue>1.84906e-68</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>333</Hsp_query-to> <Hsp_hit-from>11</Hsp_hit-from> @@ -317,9 +317,9 @@ </Hsp> <Hsp> <Hsp_num>2</Hsp_num> - <Hsp_bit-score>129.412894877266</Hsp_bit-score> + <Hsp_bit-score>129.413</Hsp_bit-score> <Hsp_score>324</Hsp_score> - <Hsp_evalue>5.28220874623366e-34</Hsp_evalue> + <Hsp_evalue>4.62305e-36</Hsp_evalue> <Hsp_query-from>3174</Hsp_query-from> <Hsp_query-to>3368</Hsp_query-to> <Hsp_hit-from>248</Hsp_hit-from> @@ -336,9 +336,9 @@ </Hsp> <Hsp> <Hsp_num>3</Hsp_num> - <Hsp_bit-score>120.938504207085</Hsp_bit-score> + <Hsp_bit-score>120.939</Hsp_bit-score> <Hsp_score>302</Hsp_score> - <Hsp_evalue>1.87871691987854e-31</Hsp_evalue> + <Hsp_evalue>2.85192e-33</Hsp_evalue> <Hsp_query-from>2855</Hsp_query-from> <Hsp_query-to>3022</Hsp_query-to> <Hsp_hit-from>177</Hsp_hit-from> @@ -355,9 +355,9 @@ </Hsp> <Hsp> <Hsp_num>4</Hsp_num> - <Hsp_bit-score>118.242107175663</Hsp_bit-score> + <Hsp_bit-score>118.242</Hsp_bit-score> <Hsp_score>295</Hsp_score> - <Hsp_evalue>1.21774886471054e-30</Hsp_evalue> + <Hsp_evalue>2.16231e-32</Hsp_evalue> <Hsp_query-from>1404</Hsp_query-from> <Hsp_query-to>1580</Hsp_query-to> <Hsp_hit-from>119</Hsp_hit-from> @@ -374,9 +374,9 @@ </Hsp> <Hsp> <Hsp_num>5</Hsp_num> - <Hsp_bit-score>56.2249754529693</Hsp_bit-score> + <Hsp_bit-score>56.225</Hsp_bit-score> <Hsp_score>134</Hsp_score> - <Hsp_evalue>5.68296036241677e-12</Hsp_evalue> + <Hsp_evalue>2.05678e-12</Hsp_evalue> <Hsp_query-from>4222</Hsp_query-from> <Hsp_query-to>4296</Hsp_query-to> <Hsp_hit-from>312</Hsp_hit-from> @@ -478,9 +478,9 @@ <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> - <Hsp_bit-score>613.993961381297</Hsp_bit-score> + <Hsp_bit-score>613.994</Hsp_bit-score> <Hsp_score>1582</Hsp_score> - <Hsp_evalue>1.57028732393616e-180</Hsp_evalue> + <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>978</Hsp_query-to> <Hsp_hit-from>11</Hsp_hit-from> @@ -582,7 +582,7 @@ <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> - <Hsp_bit-score>641.728330847346</Hsp_bit-score> + <Hsp_bit-score>641.728</Hsp_bit-score> <Hsp_score>1654</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> @@ -686,9 +686,9 @@ <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> - <Hsp_bit-score>559.295621601033</Hsp_bit-score> + <Hsp_bit-score>559.296</Hsp_bit-score> <Hsp_score>1440</Hsp_score> - <Hsp_evalue>6.32632556748138e-164</Hsp_evalue> + <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>23</Hsp_query-from> <Hsp_query-to>1018</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> @@ -719,4 +719,4 @@ </Iteration_stat> </Iteration> </BlastOutput_iterations> -</BlastOutput> +</BlastOutput> \ No newline at end of file