Mercurial > repos > peterjc > ncbi_blast_plus
diff test-data/blastx_rhodopsin_vs_four_human.xml @ 30:5ec998a3530c draft
Uploaded v0.0.21, includes support for masking, uses macros internally, and now targets BLAST+ 2.2.27 rather than BLAST+ 2.2.26
| author | peterjc |
|---|---|
| date | Tue, 08 Oct 2013 05:08:26 -0400 |
| parents | cf4903f5c81f |
| children | 5402f9b0d508 |
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--- a/test-data/blastx_rhodopsin_vs_four_human.xml Mon Sep 23 06:13:22 2013 -0400 +++ b/test-data/blastx_rhodopsin_vs_four_human.xml Tue Oct 08 05:08:26 2013 -0400 @@ -2,7 +2,7 @@ <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> <BlastOutput> <BlastOutput_program>blastx</BlastOutput_program> - <BlastOutput_version>BLASTX 2.2.26+</BlastOutput_version> + <BlastOutput_version>BLASTX 2.2.27+</BlastOutput_version> <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> <BlastOutput_db></BlastOutput_db> <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> @@ -28,8 +28,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>29</Statistics_hsp-len> - <Statistics_eff-space>102080</Statistics_eff-space> + <Statistics_hsp-len>30</Statistics_hsp-len> + <Statistics_eff-space>119944</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -47,8 +47,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>29</Statistics_hsp-len> - <Statistics_eff-space>102080</Statistics_eff-space> + <Statistics_hsp-len>30</Statistics_hsp-len> + <Statistics_eff-space>119944</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -66,8 +66,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>29</Statistics_hsp-len> - <Statistics_eff-space>102080</Statistics_eff-space> + <Statistics_hsp-len>30</Statistics_hsp-len> + <Statistics_eff-space>119944</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -90,8 +90,8 @@ <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> - <Hsp_bit-score>662.144</Hsp_bit-score> - <Hsp_score>1707</Hsp_score> + <Hsp_bit-score>639.032</Hsp_bit-score> + <Hsp_score>1647</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>1044</Hsp_query-to> @@ -114,8 +114,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>29</Statistics_hsp-len> - <Statistics_eff-space>102080</Statistics_eff-space> + <Statistics_hsp-len>30</Statistics_hsp-len> + <Statistics_eff-space>119944</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -132,8 +132,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>32</Statistics_hsp-len> - <Statistics_eff-space>155472</Statistics_eff-space> + <Statistics_hsp-len>33</Statistics_hsp-len> + <Statistics_eff-space>183143</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -151,8 +151,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>32</Statistics_hsp-len> - <Statistics_eff-space>155472</Statistics_eff-space> + <Statistics_hsp-len>33</Statistics_hsp-len> + <Statistics_eff-space>183143</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -170,8 +170,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>32</Statistics_hsp-len> - <Statistics_eff-space>155472</Statistics_eff-space> + <Statistics_hsp-len>33</Statistics_hsp-len> + <Statistics_eff-space>183143</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -194,8 +194,8 @@ <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> - <Hsp_bit-score>575.089</Hsp_bit-score> - <Hsp_score>1481</Hsp_score> + <Hsp_bit-score>551.206</Hsp_bit-score> + <Hsp_score>1419</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>42</Hsp_query-from> <Hsp_query-to>1037</Hsp_query-to> @@ -218,8 +218,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>32</Statistics_hsp-len> - <Statistics_eff-space>155472</Statistics_eff-space> + <Statistics_hsp-len>33</Statistics_hsp-len> + <Statistics_eff-space>183143</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -236,8 +236,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>39</Statistics_hsp-len> - <Statistics_eff-space>430746</Statistics_eff-space> + <Statistics_hsp-len>40</Statistics_hsp-len> + <Statistics_eff-space>509838</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -255,8 +255,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>39</Statistics_hsp-len> - <Statistics_eff-space>430746</Statistics_eff-space> + <Statistics_hsp-len>40</Statistics_hsp-len> + <Statistics_eff-space>509838</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -274,8 +274,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>39</Statistics_hsp-len> - <Statistics_eff-space>430746</Statistics_eff-space> + <Statistics_hsp-len>40</Statistics_hsp-len> + <Statistics_eff-space>509838</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -298,9 +298,9 @@ <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> - <Hsp_bit-score>224.172</Hsp_bit-score> - <Hsp_score>570</Hsp_score> - <Hsp_evalue>1.84906e-68</Hsp_evalue> + <Hsp_bit-score>220.32</Hsp_bit-score> + <Hsp_score>560</Hsp_score> + <Hsp_evalue>4.29169e-67</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>333</Hsp_query-to> <Hsp_hit-from>11</Hsp_hit-from> @@ -317,9 +317,9 @@ </Hsp> <Hsp> <Hsp_num>2</Hsp_num> - <Hsp_bit-score>129.413</Hsp_bit-score> - <Hsp_score>324</Hsp_score> - <Hsp_evalue>4.62305e-36</Hsp_evalue> + <Hsp_bit-score>127.487</Hsp_bit-score> + <Hsp_score>319</Hsp_score> + <Hsp_evalue>1.95079e-35</Hsp_evalue> <Hsp_query-from>3174</Hsp_query-from> <Hsp_query-to>3368</Hsp_query-to> <Hsp_hit-from>248</Hsp_hit-from> @@ -336,28 +336,28 @@ </Hsp> <Hsp> <Hsp_num>3</Hsp_num> - <Hsp_bit-score>120.939</Hsp_bit-score> - <Hsp_score>302</Hsp_score> - <Hsp_evalue>2.85192e-33</Hsp_evalue> + <Hsp_bit-score>121.324</Hsp_bit-score> + <Hsp_score>303</Hsp_score> + <Hsp_evalue>1.96633e-33</Hsp_evalue> <Hsp_query-from>2855</Hsp_query-from> - <Hsp_query-to>3022</Hsp_query-to> + <Hsp_query-to>3031</Hsp_query-to> <Hsp_hit-from>177</Hsp_hit-from> - <Hsp_hit-to>232</Hsp_hit-to> + <Hsp_hit-to>235</Hsp_hit-to> <Hsp_query-frame>2</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>54</Hsp_identity> - <Hsp_positive>56</Hsp_positive> + <Hsp_positive>57</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> - <Hsp_align-len>56</Hsp_align-len> - <Hsp_qseq>RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKE</Hsp_qseq> - <Hsp_hseq>RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKE</Hsp_hseq> - <Hsp_midline>RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE</Hsp_midline> + <Hsp_align-len>59</Hsp_align-len> + <Hsp_qseq>RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS</Hsp_qseq> + <Hsp_hseq>RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA</Hsp_hseq> + <Hsp_midline>RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE +</Hsp_midline> </Hsp> <Hsp> <Hsp_num>4</Hsp_num> - <Hsp_bit-score>118.242</Hsp_bit-score> - <Hsp_score>295</Hsp_score> - <Hsp_evalue>2.16231e-32</Hsp_evalue> + <Hsp_bit-score>97.0561</Hsp_bit-score> + <Hsp_score>240</Hsp_score> + <Hsp_evalue>1.16473e-25</Hsp_evalue> <Hsp_query-from>1404</Hsp_query-from> <Hsp_query-to>1580</Hsp_query-to> <Hsp_hit-from>119</Hsp_hit-from> @@ -374,22 +374,22 @@ </Hsp> <Hsp> <Hsp_num>5</Hsp_num> - <Hsp_bit-score>56.225</Hsp_bit-score> - <Hsp_score>134</Hsp_score> - <Hsp_evalue>2.05678e-12</Hsp_evalue> + <Hsp_bit-score>56.9954</Hsp_bit-score> + <Hsp_score>136</Hsp_score> + <Hsp_evalue>1.23645e-12</Hsp_evalue> <Hsp_query-from>4222</Hsp_query-from> - <Hsp_query-to>4296</Hsp_query-to> + <Hsp_query-to>4299</Hsp_query-to> <Hsp_hit-from>312</Hsp_hit-from> - <Hsp_hit-to>336</Hsp_hit-to> + <Hsp_hit-to>337</Hsp_hit-to> <Hsp_query-frame>1</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>23</Hsp_identity> <Hsp_positive>24</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> - <Hsp_align-len>25</Hsp_align-len> - <Hsp_qseq>QFRNCMLTTLCCGKNPLGDDEASTT</Hsp_qseq> - <Hsp_hseq>QFRNCMLTTICCGKNPLGDDEASAT</Hsp_hseq> - <Hsp_midline>QFRNCMLTT+CCGKNPLGDDEAS T</Hsp_midline> + <Hsp_align-len>26</Hsp_align-len> + <Hsp_qseq>QFRNCMLTTLCCGKNPLGDDEASTTA</Hsp_qseq> + <Hsp_hseq>QFRNCMLTTICCGKNPLGDDEASATV</Hsp_hseq> + <Hsp_midline>QFRNCMLTT+CCGKNPLGDDEAS T </Hsp_midline> </Hsp> </Hit_hsps> </Hit> @@ -398,8 +398,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>39</Statistics_hsp-len> - <Statistics_eff-space>430746</Statistics_eff-space> + <Statistics_hsp-len>40</Statistics_hsp-len> + <Statistics_eff-space>509838</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -416,8 +416,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>28</Statistics_hsp-len> - <Statistics_eff-space>95680</Statistics_eff-space> + <Statistics_hsp-len>29</Statistics_hsp-len> + <Statistics_eff-space>112346</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -435,8 +435,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>28</Statistics_hsp-len> - <Statistics_eff-space>95680</Statistics_eff-space> + <Statistics_hsp-len>29</Statistics_hsp-len> + <Statistics_eff-space>112346</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -454,8 +454,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>28</Statistics_hsp-len> - <Statistics_eff-space>95680</Statistics_eff-space> + <Statistics_hsp-len>29</Statistics_hsp-len> + <Statistics_eff-space>112346</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -478,8 +478,8 @@ <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> - <Hsp_bit-score>613.994</Hsp_bit-score> - <Hsp_score>1582</Hsp_score> + <Hsp_bit-score>589.341</Hsp_bit-score> + <Hsp_score>1518</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>978</Hsp_query-to> @@ -502,8 +502,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>28</Statistics_hsp-len> - <Statistics_eff-space>95680</Statistics_eff-space> + <Statistics_hsp-len>29</Statistics_hsp-len> + <Statistics_eff-space>112346</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -520,8 +520,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>29</Statistics_hsp-len> - <Statistics_eff-space>102080</Statistics_eff-space> + <Statistics_hsp-len>30</Statistics_hsp-len> + <Statistics_eff-space>119944</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -539,8 +539,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>29</Statistics_hsp-len> - <Statistics_eff-space>102080</Statistics_eff-space> + <Statistics_hsp-len>30</Statistics_hsp-len> + <Statistics_eff-space>119944</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -558,8 +558,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>29</Statistics_hsp-len> - <Statistics_eff-space>102080</Statistics_eff-space> + <Statistics_hsp-len>30</Statistics_hsp-len> + <Statistics_eff-space>119944</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -582,8 +582,8 @@ <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> - <Hsp_bit-score>641.728</Hsp_bit-score> - <Hsp_score>1654</Hsp_score> + <Hsp_bit-score>619.387</Hsp_bit-score> + <Hsp_score>1596</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>1044</Hsp_query-to> @@ -606,8 +606,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>29</Statistics_hsp-len> - <Statistics_eff-space>102080</Statistics_eff-space> + <Statistics_hsp-len>30</Statistics_hsp-len> + <Statistics_eff-space>119944</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -624,8 +624,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>31</Statistics_hsp-len> - <Statistics_eff-space>132189</Statistics_eff-space> + <Statistics_hsp-len>32</Statistics_hsp-len> + <Statistics_eff-space>155584</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -643,8 +643,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>31</Statistics_hsp-len> - <Statistics_eff-space>132189</Statistics_eff-space> + <Statistics_hsp-len>32</Statistics_hsp-len> + <Statistics_eff-space>155584</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -662,8 +662,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>31</Statistics_hsp-len> - <Statistics_eff-space>132189</Statistics_eff-space> + <Statistics_hsp-len>32</Statistics_hsp-len> + <Statistics_eff-space>155584</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> @@ -686,22 +686,22 @@ <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> - <Hsp_bit-score>559.296</Hsp_bit-score> - <Hsp_score>1440</Hsp_score> + <Hsp_bit-score>532.717</Hsp_bit-score> + <Hsp_score>1371</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>23</Hsp_query-from> - <Hsp_query-to>1018</Hsp_query-to> + <Hsp_query-to>1021</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> - <Hsp_hit-to>332</Hsp_hit-to> + <Hsp_hit-to>333</Hsp_hit-to> <Hsp_query-frame>2</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>272</Hsp_identity> <Hsp_positive>307</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> - <Hsp_align-len>332</Hsp_align-len> - <Hsp_qseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKXXXXXXXXXXXXXXXXXXVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEED</Hsp_qseq> - <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDE</Hsp_hseq> - <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE+HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA+YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR+CM+TT+CCGKNP +++</Hsp_midline> + <Hsp_align-len>333</Hsp_align-len> + <Hsp_qseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKXXXXXXXXXXXXXXXXXXVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDG</Hsp_qseq> + <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA</Hsp_hseq> + <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE+HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA+YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR+CM+TT+CCGKNP +++ </Hsp_midline> </Hsp> </Hit_hsps> </Hit> @@ -710,8 +710,8 @@ <Statistics> <Statistics_db-num>0</Statistics_db-num> <Statistics_db-len>0</Statistics_db-len> - <Statistics_hsp-len>31</Statistics_hsp-len> - <Statistics_eff-space>132189</Statistics_eff-space> + <Statistics_hsp-len>32</Statistics_hsp-len> + <Statistics_eff-space>155584</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy>