Mercurial > repos > peterjc > mira4_assembler

diff tools/mira4/mira4.py @ 5:ffefb87bd414 draft

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Uploaded v0.0.1 preview 5, using MIRA 4.0 RC4, supports segment_placement (pairing type)
author peterjc
date Tue, 15 Oct 2013 12:07:34 -0400
parents df86ed992a1b
children 902f01c1084b
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line diff
--- a/tools/mira4/mira4.py	Fri Oct 11 04:28:45 2013 -0400
+++ b/tools/mira4/mira4.py	Tue Oct 15 12:07:34 2013 -0400
@@ -31,14 +31,13 @@
     return ver.split("\n", 1)[0]
 
 
-os.environ["PATH"] = "/mnt/galaxy/downloads/mira_4.0rc3_linux-gnu_x86_64_static/bin/:%s" % os.environ["PATH"]
+os.environ["PATH"] = "/mnt/galaxy/downloads/mira_4.0rc4_linux-gnu_x86_64_static/bin/:%s" % os.environ["PATH"]
 mira_binary = "mira"
 mira_ver = get_version(mira_binary)
 if not mira_ver.strip().startswith("4.0"):
     stop_err("This wrapper is for MIRA V4.0, not:\n%s" % mira_ver)
-if "-v" in sys.argv:
-    print "MIRA wrapper version %s," % WRAPPER_VER
-    print mira_ver
+if "-v" in sys.argv or "--version" in sys.argv:
+    print "%s, MIRA wrapper version %s" % (mira_ver, WRAPPER_VER)
     sys.exit(0)