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comparison tools/effectiveT3/tool_dependencies.xml @ 22:7e50c54e70e6 draft

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Tweak install recipe
author peterjc
date Tue, 13 Oct 2015 11:44:18 -0400
parents e870c7bf6c5a
children 69ab4d862db2
comparison
equal deleted inserted replaced
21:e870c7bf6c5a 22:7e50c54e70e6
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="effectiveT3" version="1.0.1"> 3 <package name="effectiveT3" version="1.0.1">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <!-- Set environment variable so Python script knows where to look --> 6 <!-- Main JAR file -->
7 <action type="download_file">http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_GUI-1.0.1.jar</action>
8 <action type="move_file"><source>TTSS_GUI-1.0.1.jar</source><destination>$INSTALL_DIR</destination></action>
9 <!-- Model specific JAR files -->
10 <action type="make_directory">$INSTALL_DIR/module</action>
11 <action type="download_file">http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_ANIMAL-1.0.1.jar</action>
12 <action type="move_file"><source>TTSS_ANIMAL-1.0.1.jar</source><destination>$INSTALL_DIR/module/</destination></action>
13 <action type="download_file">http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_PLANT-1.0.1.jar</action>
14 <action type="move_file"><source>TTSS_PLANT-1.0.1.jar</source><destination>$INSTALL_DIR/module/</destination></action>
15 <action type="download_file">http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_STD-1.0.1.jar</action>
16 <action type="move_file"><source>TTSS_STD-1.0.1.jar</source><destination>$INSTALL_DIR/module/</destination></action>
17 <action type="download_file">http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_STD-2.0.2.jar</action>
18 <action type="move_file"><source>TTSS_STD-2.0.2.jar</source><destination>$INSTALL_DIR/module/</destination></action>
19 <!-- Make this accessible -->
7 <action type="set_environment"> 20 <action type="set_environment">
8 <environment_variable name="EFFECTIVET3" action="set_to">$INSTALL_DIR</environment_variable> 21 <environment_variable name="EFFECTIVET3" action="set_to">$INSTALL_DIR</environment_variable>
9 </action> 22 </action>
10 <!-- Main JAR file -->
11 <action type="shell_command">wget http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_GUI-1.0.1.jar</action>
12 <!-- If using action type download_file will need to move the file,
13 <action type="move_file"><source>TTSS_GUI-1.0.1.jar</source><destination>$INSTALL_DIR/</destination></action>
14 -->
15 <!-- Three model JAR files -->
16 <action type="make_directory">$INSTALL_DIR/module</action>
17 <action type="shell_command">wget http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_ANIMAL-1.0.1.jar</action>
18 <action type="move_file"><source>TTSS_ANIMAL-1.0.1.jar</source><destination>$INSTALL_DIR/module/</destination></action>
19 <action type="shell_command">wget http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_PLANT-1.0.1.jar</action>
20 <action type="move_file"><source>TTSS_PLANT-1.0.1.jar</source><destination>$INSTALL_DIR/module/</destination></action>
21 <action type="shell_command">wget http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_STD-1.0.1.jar</action>
22 <action type="move_file"><source>TTSS_STD-1.0.1.jar</source><destination>$INSTALL_DIR/module/</destination></action>
23 <action type="shell_command">wget http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_STD-2.0.2.jar</action>
24 <action type="move_file"><source>TTSS_STD-2.0.2.jar</source><destination>$INSTALL_DIR/module/</destination></action>
25 </actions> 23 </actions>
26 </install> 24 </install>
27 <readme> 25 <readme>
28 Downloads effectiveT3 v1.0.1 and associated models from http://effectors.org/ aka http://effectors.csb.univie.ac.at/ 26 Downloads effectiveT3 v1.0.1 and associated models from http://effectors.org/ aka http://effectors.csb.univie.ac.at/
27
28 Sets environment variable $EFFECTIVET3 to the directory containing the main JAR file whose subdirectory module/ holds the model JAR files.
29 </readme> 29 </readme>
30 </package> 30 </package>
31 </tool_dependency> 31 </tool_dependency>
32 32