Mercurial > repos > peterjc > count_roi_variants
changeset 15:4f71065fcf0f draft default tip
"planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/tools/count_roi_variants commit ee36da91aca79a79869e93cc3baa20cb7924669b-dirty"
author | peterjc |
---|---|
date | Thu, 13 Aug 2020 11:56:52 +0000 |
parents | 1446811c3fe8 |
children | |
files | tools/count_roi_variants/count_roi_variants.py |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
line wrap: on
line diff
--- a/tools/count_roi_variants/count_roi_variants.py Fri Feb 22 10:11:49 2019 -0500 +++ b/tools/count_roi_variants/count_roi_variants.py Thu Aug 13 11:56:52 2020 +0000 @@ -288,7 +288,7 @@ # Could recreate the region string (with no commas in start/end)? # region = "%s:%i-%i" % (ref, start, end) - tally = dict() + tally = {} # Call samtools view, don't need header so no -h added. # Only want mapped reads, thus flag filter -F 4.