# HG changeset patch # User peterjc # Date 1369826797 14400 # Node ID deb6cb2db22bf5836ff67a2a6eda4f631071cf9d # Parent 04aed2f80910fbafd860681f12e27fa6cf1bb281 Uploaded v0.0.5, take 11, try 2 threads to run on Galaxy Test cluster diff -r 04aed2f80910 -r deb6cb2db22b tools/clinod/clinod.xml --- a/tools/clinod/clinod.xml Sat May 25 09:24:02 2013 -0400 +++ b/tools/clinod/clinod.xml Wed May 29 07:26:37 2013 -0400 @@ -7,7 +7,7 @@ ##The Galaxy Tool Shed installation should define $CLINOD to point at folder ##containing both clinod-1.3.jar and the batchman binary: -java -jar \$CLINOD/clinod-1.3.jar -in="$fasta_file" -out="$tabular_file" -t=4 -f=MEDIUM_TAB -nonols -clean_sequence +java -jar \$CLINOD/clinod-1.3.jar -in="$fasta_file" -out="$tabular_file" -t=2 -f=MEDIUM_TAB -nonols -clean_sequence ##I want the number of threads to be a Galaxy config option... ##TODO - Make the -clean_sequence argument a parameter?