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comparison anarci_wrapper.xml @ 3:3d49bef78c3d draft default tip

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author p.lucas
date Tue, 30 Mar 2021 14:38:03 +0000
parents 58b36867b577
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2:58b36867b577 3:3d49bef78c3d
1 <tool id="ANARCI" name="ANARCI" version="1.0"> 1 <tool id="ANARCI" name="ANARCI" version="3.0">
2 <description>Use ANARCI tools to use HADDOCK-antibody-antigen after.</description> 2 <description>Use ANARCI tools to use HADDOCK-antibody-antigen after.</description>
3 <command detect_errors="exit_code"><![CDATA[ 3 <command detect_errors="exit_code"><![CDATA[
4 source /home/galaxy/data/_conda/bin/activate Ab-HADDOCK; 4 source /home/galaxy/data/_conda/bin/activate Ab-HADDOCK;
5 python2.7 /home/galaxy/shed_tools/testtoolshed.g2.bx.psu.edu/repos/p.lucas/anarci/9a66e3a9ff53/anarci/HADDOCK-antibody-antigen/ImmunoPDB.py -i '${input}' -o '${output}' --scheme ${scheme} --splitscfv 5 python2.7 /home/galaxy/HADDOCK-antibody-antigen/ImmunoPDB.py -i '${input}' -o '${output}' --scheme ${scheme} --splitscfv
6 #if $receptor 6 #if $receptor
7 --receptor ${receptor} 7 --receptor ${receptor}
8 #end if; 8 #end if;
9 #if $fvonly 9 #if $fvonly
10 --fvonly 10 --fvonly