Mercurial > repos > nilesh > eautils
comparison fastq-join.xml @ 1:6dd8062546e8 default tip
fixed xmls
| author | nilesh |
|---|---|
| date | Mon, 15 Jul 2013 21:50:45 -0500 |
| parents | |
| children |
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| 0:ae2ef1b65c47 | 1:6dd8062546e8 |
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| 1 <tool id="fast-join" name="fastq join"> | |
| 2 <description>Fastq-join: merge overlapping parked end reads</description> | |
| 3 <requirements> | |
| 4 <requirement type="package" version="1.2.8">zlib</requirement> | |
| 5 <requirement type="package" version="0.7.5a">bwa</requirement> | |
| 6 </requirements> | |
| 7 <command interpreter="python"> | |
| 8 fastq-join $input1 $input2 -o $output1 -o $output2 -o $output3 | |
| 9 | |
| 10 </command> | |
| 11 | |
| 12 <inputs> | |
| 13 | |
| 14 <param name="input1" type="data" format="fastq" label="Source file 1"/> | |
| 15 <param name="input2" type="data" format="fastq" label="Source file 2"/> | |
| 16 </inputs> | |
| 17 | |
| 18 <outputs> | |
| 19 <data format="txt" name="output1" label="output file un1"/> | |
| 20 <data format="txt" name="output2" label="output file un2"/> | |
| 21 <data format="txt" name="output3" label="output file join"/> | |
| 22 | |
| 23 </outputs> | |
| 24 | |
| 25 <help> | |
| 26 This tool computes GC content from a FASTA file. | |
| 27 </help> | |
| 28 | |
| 29 </tool> |