# HG changeset patch
# User mvdbeek
# Date 1483437748 18000
# Node ID 37cac55c1081722c550feb7474028c4544494c8e
# Parent  584220a3c52019ddf12a9663dd2ae3fd5f20c49e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/yaha commit 41b852cad408786bc7049f3c002f85d1aebda063-dirty

diff -r 584220a3c520 -r 37cac55c1081 yaha.xml
--- a/yaha.xml	Tue Jan 03 04:31:53 2017 -0500
+++ b/yaha.xml	Tue Jan 03 05:02:28 2017 -0500
@@ -13,7 +13,7 @@
             #if $reference_genome.reference_genome_source == "history":
                 ln -f -s "$reference_genome.history_item" genome.fa &&
             #elif $reference_genome.reference_genome_source == "reference":
-                ln -f -s "$reference_genome.fasta_item" genome.fa &&
+                ln -f -s "$reference_genome.fasta_item.fields.path" genome.fa &&
             #end if
             yaha -g genome.fa -H $reference_genome.maxHitsIndex -L $reference_genome.wordLenIndex -S $reference_genome.skipDistanceIndex &&
             #set maxHitsIndex = "%s%s" % ("0" * (5 - len(str($reference_genome.maxHitsIndex))), $reference_genome.maxHitsIndex)