Mercurial > repos > mvdbeek > test_sra

changeset 4:c01e4b9ccbc6 draft

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planemo upload commit 96ecd86165525684766848f98a1c3be4353ec3b1-dirty
author mvdbeek
date Fri, 14 Aug 2015 12:55:33 -0400
parents fb21b2e48a1e
children 167041a5893b
files tool_dependencies.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Fri Aug 14 12:52:22 2015 -0400
+++ b/tool_dependencies.xml	Fri Aug 14 12:55:33 2015 -0400
@@ -6,19 +6,19 @@
         <action type="make_directory">src</action>
         <action type="make_directory">build</action>
         <action type="change_directory">src</action>
-        <action type="download_by_url">https://github.com/ncbi/sra-tools/archive/2.5.2.tar.gz</action>
+        <action type="download_file">https://github.com/ncbi/sra-tools/archive/2.5.2.tar.gz</action>
         <action type="shell_command">
             tar -xf ../2.5.2.tar.gz
             rm 2.5.2.tar.gz
             mv sra-tools-2.5.2 sra-tools
         </action>
-        <action type="download_by_url">https://github.com/ncbi/ngs/archive/1.1.3.tar.gz</action>
+        <action type="download_file">https://github.com/ncbi/ngs/archive/1.1.3.tar.gz</action>
         <action type="shell_command">
             tar -xf ../1.1.3.tar.gz
             rm 1.1.3.tar.gz
             mv ngs-1.1.3 ngs      
         </action>
-        <action type="download_by_url">https://github.com/ncbi/ncbi-vdb/archive/2.5.2.tar.gz</action>
+        <action type="download_file">https://github.com/ncbi/ncbi-vdb/archive/2.5.2.tar.gz</action>
         <action type="shell_command">
             tar -xf ../2.5.2.tar.gz
             rm 2.5.2.tar.gz