# HG changeset patch # User mvdbeek # Date 1439638685 14400 # Node ID f382eaecfd34c2ad722e9401637a30f840558678 # Parent e80d689208b3d5426b4ad8de2fbc21529d1cc94b planemo upload commit 96ecd86165525684766848f98a1c3be4353ec3b1-dirty diff -r e80d689208b3 -r f382eaecfd34 tool_dependencies.xml --- a/tool_dependencies.xml Sat Aug 15 07:30:52 2015 -0400 +++ b/tool_dependencies.xml Sat Aug 15 07:38:05 2015 -0400 @@ -3,7 +3,7 @@ - https://github.com/ncbi/ncbi-vdb/archive/2.5.2.tar.gz + https://github.com/ncbi/ncbi-vdb/archive/2.5.2.tar.gz target_filename=ncbi-vdb-2.5.2.tar.gz LD_LIBRARY_PATH=LD_LIBRARY_PATH:$INSTALL_DIR/lib64:$INSTALL_DIR/lib ./configure --prefix=$INSTALL_DIR --build-prefix=$INSTALL_DIR/build @@ -11,14 +11,14 @@ make install rm ../2.5.2.tar.gz - https://github.com/ncbi/ngs/archive/1.1.3.tar.gz + https://github.com/ncbi/ngs/archive/1.1.3.tar.gz target_filename=ngs-1.1.3.tar.gz LD_LIBRARY_PATH=LD_LIBRARY_PATH:$INSTALL_DIR/lib64:$INSTALL_DIR/lib ./configure --prefix=$INSTALL_DIR --build-prefix=$INSTALL_DIR/build make make install - https://github.com/ncbi/sra-tools/archive/2.5.2.tar.gz + https://github.com/ncbi/sra-tools/archive/2.5.2.tar.gz target_filename=sra-tools-2.5.2.tar.gz ./configure --prefix=$INSTALL_DIR --build-prefix=$INSTALL_DIR/build sed -i -e "109s/-static//" tools/copycat/Makefile