Mercurial > repos > mvdbeek > sra_tools
diff fastq_dump.xml @ 5:6f68b86da01a draft default tip
planemo upload for repository https://bitbucket.org/drosofff/gedtools/ commit d754d6a6fc019236513d2228542fe1a2757d55cf-dirty
author | mvdbeek |
---|---|
date | Wed, 30 Sep 2015 11:47:04 -0400 |
parents | 68527898a9ea |
children |
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--- a/fastq_dump.xml Fri Sep 25 13:19:15 2015 -0400 +++ b/fastq_dump.xml Wed Sep 30 11:47:04 2015 -0400 @@ -1,4 +1,4 @@ -<tool id="fastq_dump" name="Extract reads" version="1.2.4"> +<tool id="fastq_dump" name="Extract reads" version="1.2.5"> <description>in FASTQ/A format from NCBI SRA.</description> <macros> <import>sra_macros.xml</import> @@ -8,7 +8,7 @@ <![CDATA[ ## Need to set the home directory to the current working directory, ## else the tool tries to write to home/.ncbi and fails when used - ## with a cluster manager. + ## within production environments. export HOME=\$PWD; vdb-config --restore-defaults; #if $input.input_select == "file":