comparison tool_dependencies.xml @ 0:1fac626f3f7f draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_5_18
author mvdbeek
date Thu, 03 Mar 2016 07:00:15 -0500
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children e67aade713e4
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-1:000000000000 0:1fac626f3f7f
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="broken" version="1.0.0">
4 <repository changeset_revision="e4ddd7eb160a" name="package_broken_1_0_0" owner="mvdbeek" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="switch" version="1.0.0">
7 <install version="1.0">
8 <actions>
9 <action type="download_by_url">https://pypi.python.org/packages/source/b/biopython/biopython-1.61.tar.gz</action>
10 <action type="set_environment">
11 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
12
13 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
14 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
15 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_MATPLOTLIB]</environment_variable>
16
17 <environment_variable action="set_to" name="PYTHONPATH_BIOPYTHON">$INSTALL_DIR/lib/python</environment_variable>
18 </action>
19 </actions>
20 </install>
21 <readme>The PYTHONPATH for biopython can be accessed through PYTHONPATH_BIOPYTHON.</readme>
22 </package>
23 </tool_dependency>