Mercurial > repos > mvdbeek > package_ngs_1_1_3
view tool_dependencies.xml @ 6:b2c6f4a8dce2 draft default tip
planemo upload commit 96ecd86165525684766848f98a1c3be4353ec3b1-dirty
author | mvdbeek |
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date | Sat, 15 Aug 2015 11:02:36 -0400 |
parents | 0fe07850acd0 |
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<?xml version="1.0"?> <tool_dependency> <!-- <package name="ncbi_vdb" version="2.5.2"> <repository name="package_ncbi_vdb_2_5_2" owner="mvdbeek" prior_installation_required="True" /> </package> --> <package name="perl" version="5.18.1"> <repository changeset_revision="4d932b1a336b" name="package_perl_5_18_test_sed" owner="mvdbeek" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="ngs" version="1.1.3"> <install version="1.0"> <actions> <action type="setup_perl_environment"> <repository changeset_revision="4d932b1a336b" name="package_perl_5_18_test_sed" owner="mvdbeek" toolshed="https://testtoolshed.g2.bx.psu.edu"> <package name="perl" version="5.18.1" /> </repository> <package>File::Copy</package> <package>File::Spec</package> <package>File::Copy::Recursive</package> </action> <action target_filename="ngs-1.1.3.tar.gz" type="download_by_url">https://github.com/ncbi/ngs/archive/1.1.3.tar.gz</action> <action type="autoconf">--prefix=$INSTALL_DIR --build=$INSTALL_DIR</action> <action type="set_environment"> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> </action> </actions> </install> <readme> ncbi-ngs, required for sra-tools package. </readme> </package> </tool_dependency>