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comparison tool_dependencies.xml @ 4:f3ab5d99ceba draft default tip

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planemo upload for repository https://bitbucket.org/drosofff/gedtools/
author mvdbeek
date Fri, 14 Aug 2015 09:58:18 -0400
parents fc4bf31c255c
children
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3:fc4bf31c255c 4:f3ab5d99ceba
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="aspc" version="3.6.0.106805"> 3 <package name="aspc" version="3.6.0.106805">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions_group>
6 <!-- <action type="download_by_url">http://download.asperasoft.com/download/sw/connect/3.6.0/AsperaConnectInstaller-3.6.0.106805.dmg</action> --> 6 <actions architecture="x86_64" os="darwin">
7 <action type="download_by_url">https://bitbucket.org/mvdbeek/galaxy_downloads/downloads/AsperaConnectInstaller-3.6.0.106805.dmg</action> 7 <!-- <action type="download_by_url">http://download.asperasoft.com/download/sw/connect/3.6.0/AsperaConnectInstaller-3.6.0.106805.dmg</action> -->
8 <action type="shell_command">hdiutil attach -mountpoint install AsperaConnectInstaller-3.6.0.106805.dmg</action> 8 <action type="download_by_url">https://bitbucket.org/mvdbeek/galaxy_downloads/downloads/AsperaConnectInstaller-3.6.0.106805.dmg</action>
9 <action type="shell_command">pkgutil --expand install/AsperaConnectInstaller.pkg extract</action> 9 <action type="shell_command">hdiutil attach -mountpoint install AsperaConnectInstaller-3.6.0.106805.dmg</action>
10 <action type="shell_command">cat extract/AsperaConnect.pkg/Payload | gzip -d - | cpio -id</action> 10 <action type="shell_command">pkgutil --expand install/AsperaConnectInstaller.pkg extract</action>
11 <action type="shell_command">hdiutil detach install</action> 11 <action type="shell_command">cat extract/AsperaConnect.pkg/Payload | gzip -d - | cpio -id</action>
12 <action type="move_directory_files"> 12 <action type="shell_command">hdiutil detach install</action>
13 <source_directory>Applications/Aspera Connect.app/Contents/Resources/</source_directory> 13 <action type="move_directory_files">
14 <destination_directory>$INSTALL_DIR/bin</destination_directory> 14 <source_directory>Applications/Aspera Connect.app/Contents/Resources/</source_directory>
15 </action> 15 <destination_directory>$INSTALL_DIR/bin</destination_directory>
16 <action type="set_environment"> 16 </action>
17 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> 17 <action type="set_environment">
18 </action> 18 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
19 </actions> 19 </action>
20 </actions>
21 </actions_group>
20 </install> 22 </install>
23
21 <readme> 24 <readme>
22 This tool dependency definition downloads and installs the aspera connect client, used for accelerating 25 This tool dependency definition downloads and installs the aspera connect client, used for accelerating
23 ncbi sra downloads. 26 ncbi sra downloads.
24 </readme> 27 </readme>
25 </package> 28 </package>