Mercurial > repos > mvdbeek > igv_take_screenshots

changeset 28:d6541171175c draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 0437e9e56f0af2ccfb5f119b0f290109807ed9b0-dirty
author mvdbeek
date Fri, 15 Jun 2018 13:11:56 -0400
parents 676591c44f64
children dd61761307ca
files igv_make_screenshots.xml
diffstat 1 files changed, 2 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/igv_make_screenshots.xml	Fri Jun 15 13:04:52 2018 -0400
+++ b/igv_make_screenshots.xml	Fri Jun 15 13:11:56 2018 -0400
@@ -18,7 +18,6 @@
         -->
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
-#import re
 #if $genome_source.input_type_selector == 'history':
     ln -s '$genome_source.genome' genome.fa &&
 #else:
@@ -45,8 +44,7 @@
 #end if
     ]]></command>
     <configfiles>
-        <configfile name="igv_session">
-<![CDATA[<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+        <configfile name="igv_session"><![CDATA[<?xml version="1.0" encoding="UTF-8" standalone="no"?>
 <Session genome="genome.fa" hasGeneTrack="false" hasSequenceTrack="true" version="8">
     <Resources>
         #for $i, $inputsection in enumerate($inputfiles):
@@ -84,8 +82,7 @@
     <PanelLayout dividerFractions="0.004995836802664446,0.12905911740216486,0.2681099084096586,0.5512073272273106,0.8409658617818485"/>
 </Session>
         ]]></configfile>
-        <configfile name="igv_session_remote">
-<![CDATA[<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+        <configfile name="igv_session_remote"><![CDATA[<?xml version="1.0" encoding="UTF-8" standalone="no"?>
 <Session genome="dm6" hasGeneTrack="true" hasSequenceTrack="true" version="8">
     <Resources>#for $i, $inputsection in enumerate($inputfiles):@DISPLAY_LINK@<Resource path="$display_link"/>#end for
     </Resources>