Mercurial > repos > mvdbeek > igv_take_screenshots

changeset 7:755832a07414 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 4824aeaa8107bd30ec786e8ca81779f053f0e736-dirty
author mvdbeek
date Mon, 03 Jul 2017 10:03:17 -0400
parents 54bc6c6d667c
children ff0fb6dde58e
files igv_make_screenshots.xml
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/igv_make_screenshots.xml	Mon Jul 03 08:53:28 2017 -0400
+++ b/igv_make_screenshots.xml	Mon Jul 03 10:03:17 2017 -0400
@@ -17,7 +17,8 @@
         cat load_session.txt '$script_file' '$exit_session' > igv_script.txt &&
         python $__tool_directory__/xvfb_igv.py igv_script.txt $width,$height &&
         cp '$igv_session' '$igv_session_out' &&
-        zip '$screenshots_out' *.png
+        zip screenshots.zip *.png &&
+        cp screenshots.zip '$screenshots_out'
     ]]></command>
     <configfiles>
         <configfile name="igv_session"><![CDATA[#set $genome=$inputfiles[0].input.metadata.dbkey