Mercurial > repos > mvdbeek > igv_take_screenshots

comparison xvfb_igv.py @ 0:d828cf6bff42 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 4824aeaa8107bd30ec786e8ca81779f053f0e736-dirty
author mvdbeek
date Mon, 26 Jun 2017 10:00:06 -0400
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children 64eb1ffd7872
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-1:000000000000 0:d828cf6bff42
1 import os
2 import subprocess
3 import sys
4
5 import xvfbwrapper
6
7
8 def take_screenshots(igv_script, screensize):
9 width, height = screensize.split(',')
10 with xvfbwrapper.Xvfb(width=width, height=height) as xvfb:
11 exit_code = subprocess.call(['igv', '--batch', igv_script], env=os.environ.copy())
12 sys.exit(exit_code)
13
14
15 if __name__ == '__main__':
16 take_screenshots(sys.argv[1], sys.argv[2])
17