Mercurial > repos > mvdbeek > get_reference_fasta

comparison get_reference_fasta.xml @ 2:d79153e68957 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author mvdbeek
date Tue, 28 Apr 2015 09:59:01 -0400
parents c15a93753e71
children
comparison
equal deleted inserted replaced
1:3e37447e0b26 2:d79153e68957
1 <tool id="get_fasta_reference" name="get fasta reference" version="0.1.0"> 1 <tool id="get_fasta_reference" name="get fasta reference" version="0.1.1">
2 <description>Obtain reference genome sequence</description> 2 <description>Obtain reference genome sequence</description>
3 <stdio> 3 <stdio>
4 <exit_code range="1:" /> 4 <exit_code range="1:" />
5 </stdio> 5 </stdio>
6 <command><![CDATA[ 6 <command><![CDATA[
10 <param help="if you wish to have your fasta sequence listed contact instance administrator" label="Select a fasta sequence" name="pre_installed_fasta" type="select"> 10 <param help="if you wish to have your fasta sequence listed contact instance administrator" label="Select a fasta sequence" name="pre_installed_fasta" type="select">
11 <options from_data_table="all_fasta"/> 11 <options from_data_table="all_fasta"/>
12 </param> 12 </param>
13 </inputs> 13 </inputs>
14 <outputs> 14 <outputs>
15 <data name="output" format="fasta" /> 15 <data name="output" label="${pre_installed_fasta.value_label}" format="fasta" />
16 </outputs> 16 </outputs>
17 <tests> 17 <tests>
18 <test> 18 <test>
19 <param name="input" value="EcR_USP_224.fa"/> 19 <param name="pre_installed_fasta" value="EcR_USP_224.fa"/>
20 <output name="output" file="EcR_USP_224.fa"/> 20 <output name="output" file="EcR_USP_224.fa"/>
21 </test> 21 </test>
22 </tests> 22 </tests>
23 <help><![CDATA[ 23 <help><![CDATA[
24 24