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comparison fermi2.xml @ 5:b7f0625940a4 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fermikit commit 47795b03c956d0f239aede8e27d2aa4e3c4c1d27
author mvdbeek
date Fri, 30 Dec 2016 12:20:21 -0500
parents a206c60df528
children
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4:a206c60df528 5:b7f0625940a4
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="aggressive"><![CDATA[
8 fermi2.pl unitig 8 fermi2.pl unitig
9 -s$genome_size 9 -s$genome_size
10 -t\${GALAXY_SLOTS:-4} 10 -t\${GALAXY_SLOTS:-4}
11 -l$readlength 11 -l$readlength
12 -p prefix " 12 -p prefix "cat
13 #for fastq in $input1: 13 #for fastq in $input1:
14 '$fastq' 14 '$fastq'
15 #end for 15 #end for
16 " 16 "
17 -T $T 17 -T $T