# HG changeset patch # User mvdbeek # Date 1468015800 14400 # Node ID 1b7f987270a63470964362437cbb046377860dca # Parent 17e93298c225cea631007ea1266f786330151dda planemo upload for repository https://github.com/mvdbeek/docker_scriptrunner/ commit 87a8f2ec706b231b2db20a9433efa34d967d35cf diff -r 17e93298c225 -r 1b7f987270a6 scriptrunner.py --- a/scriptrunner.py Fri Jul 08 18:05:50 2016 -0400 +++ b/scriptrunner.py Fri Jul 08 18:10:00 2016 -0400 @@ -394,12 +394,9 @@ subprocess.call(cmd) -def update_permissions(new_id,new_gid): - cmd1 = ['/usr//bin/find', '/', '-user', '1450', '-exec', 'chown', '-h', new_id, '{}', '\\;'] - cmd2 = ['/usr//bin/find', '/', '-group', '1450', '-exec', 'chgrp', '-h', new_gid, '{}', '\\;'] - #cmd = ["/bin/chown", "-R", "galaxy:galaxy", "/var/home/galaxy"] - subprocess.call(cmd1) - subprocess.call(cmd2) +def update_permissions(): + cmd = ["/bin/chown", "-R", "galaxy:galaxy", "/var/home/galaxy"] + subprocess.call(cmd) def main(): u = """ @@ -442,7 +439,7 @@ change_group_id(opts.group_id) os.setgid(int(opts.group_id)) os.setuid(int(opts.user_id)) - update_permissions(opts.user_id, opts.group_id) + update_permissions() r = ScriptRunner(opts) retcode = r.run() os.unlink(r.sfile)