Mercurial > repos > mvdbeek > dapars
diff dapars.py @ 14:ea5d573d6d40 draft
planemo upload for repository https://github.com/mvdbeek/dapars commit b1b007c561ea6c9db145c88b6b128d66ecd05e24-dirty
| author | mvdbeek |
|---|---|
| date | Fri, 30 Oct 2015 06:58:57 -0400 |
| parents | 538c4e2b423e |
| children | 8af6d4ad2f0a |
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--- a/dapars.py Fri Oct 30 04:59:15 2015 -0400 +++ b/dapars.py Fri Oct 30 06:58:57 2015 -0400 @@ -256,8 +256,8 @@ res["treatment_{i}_coverage_short".format(i=k)] = float(short_coverage_vector[i]) res["treatment_{i}_percent_long".format(i=k)] = percentage_long[i] res["t_stat"], res["p_value"] = stat_test(percentage_long[:num_control], percentage_long[num_control:]) - control_mean_percent = np.mean(np.array(percentage_long[:num_control])) - treatment_mean_percent = np.mean(np.array(percentage_long[num_control:])) + control_mean_percent = np.mean(percentage_long[:num_control]) + treatment_mean_percent = np.mean(percentage_long[num_control:]) res["chr"] = utr_d["chr"] res["start"] = utr_d["start"] res["end"] = utr_d["end"] @@ -380,7 +380,8 @@ return stats.ttest_ind(a,b) def gene_str_to_link(str): - return "<a href=\"{str}.svg\" type=\"image/svg+xml\" target=\"_blank\">{str}</a>".format(str=str) + return "<a href=\"{str}.svg\" type=\"image/svg+xml\">{str}</a>".format(str=str) + if __name__ == '__main__': args = parse_args()