Mercurial > repos > mvdbeek > bam_readtagger
view deploy.sh @ 71:156c4b5f3f38 draft
"planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit fee3f43c26cd13ffdb81d64a3c7809c570ba2194"
author | mvdbeek |
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date | Mon, 23 Mar 2020 16:41:55 +0000 |
parents | e68a225983d5 |
children |
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#!/bin/bash # this script uploads galaxy tools in the current directory to the galaxy toolsheds set -e CURRENT_DIR=$(dirname $0) echo "Installing planemo" # Would be great if the dependencies would persist in deployment mode pip install planemo echo "Deploying to Testtoolshed ..." planemo shed_update -r --force_repository_creation -t testtoolshed --shed_key_from_env TTS_KEY "$CURRENT_DIR" echo "Deploying to Toolshed ..." planemo shed_update -r --force_repository_creation -t toolshed --shed_key_from_env TS_KEY $CURRENT_DIR echo "Successfully deployed to toolsheds" exit 0