Mercurial > repos > mvdbeek > bam_readtagger

comparison findcluster.xml @ 74:d7768519c5fc draft default tip

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"planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit df2b1a906b8772810d995d7887e4e8f04aabc13a"
author mvdbeek
date Tue, 07 Apr 2020 17:37:50 +0000
parents 559f210b2c23
children
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73:559f210b2c23 74:d7768519c5fc
1 <tool id="findcluster" name="Find clusters of reads" version="0.5.24"> 1 <tool id="findcluster" name="Find clusters of reads" version="0.5.25">
2 <description>in bam files</description> 2 <description>in bam files</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <requirements> 6 <requirements>
7 <requirement type="package" version="0.5.24">readtagger</requirement> 7 <requirement type="package" version="0.5.25">readtagger</requirement>
8 </requirements> 8 </requirements>
9 <version_command>findcluster --version</version_command> 9 <version_command>findcluster --version</version_command>
10 <command detect_errors="aggressive"><![CDATA[ 10 <command detect_errors="aggressive"><![CDATA[
11 #import re 11 #import re
12 #set sample_name = re.sub('[^\w\-_\.\,]', '_', str( $input.element_identifier)) 12 #set sample_name = re.sub('[^\w\-_\.\,]', '_', str( $input.element_identifier))