Mercurial > repos > mvdbeek > bam_readtagger

comparison plot_coverage.xml @ 43:c2104094afd3 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit ae40519a953219ec4cc8ef4d586fc06cad88fb01
author mvdbeek
date Mon, 14 Jan 2019 13:17:50 -0500
parents fbfd1082de71
children f178b9698b66
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42:fbfd1082de71 43:c2104094afd3
1 <tool id="plot_coverage" name="Plot coverage" version="0.4.12"> 1 <tool id="plot_coverage" name="Plot coverage" version="0.4.13">
2 <description>as area plot between BAM files</description> 2 <description>as area plot between BAM files</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.4.12">readtagger</requirement> 4 <requirement type="package" version="0.4.13">readtagger</requirement>
5 </requirements> 5 </requirements>
6 <command detect_errors="aggressive"><![CDATA[ 6 <command detect_errors="aggressive"><![CDATA[
7 #import re 7 #import re
8 #set identifier1 = re.sub('[^\w\-_\.\,]', '_', str( $input1.element_identifier)) 8 #set identifier1 = re.sub('[^\w\-_\.\,]', '_', str( $input1.element_identifier))
9 #set identifier2 = re.sub('[^\w\-_\.\,]', '_', str( $input2.element_identifier)) 9 #set identifier2 = re.sub('[^\w\-_\.\,]', '_', str( $input2.element_identifier))