Mercurial > repos > mvdbeek > bam_readtagger

comparison plot_coverage.xml @ 60:b8b50498da48 draft

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"planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit c6113946113e75a169fa5bb3d09cdb7d102c329e"
author mvdbeek
date Mon, 02 Sep 2019 09:45:01 -0400
parents b254fbfc9f9b
children 46c9abed6a71
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59:b254fbfc9f9b 60:b8b50498da48
1 <tool id="plot_coverage" name="Plot coverage" version="0.5.11"> 1 <tool id="plot_coverage" name="Plot coverage" version="0.5.12">
2 <description>as area plot between BAM files</description> 2 <description>as area plot between BAM files</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.5.11">readtagger</requirement> 4 <requirement type="package" version="0.5.12">readtagger</requirement>
5 </requirements> 5 </requirements>
6 <command detect_errors="aggressive"><![CDATA[ 6 <command detect_errors="aggressive"><![CDATA[
7 #import re 7 #import re
8 #set identifier1 = re.sub('[^\w\-_\.\,]', '_', str( $input1.element_identifier)) 8 #set identifier1 = re.sub('[^\w\-_\.\,]', '_', str( $input1.element_identifier))
9 #set identifier2 = re.sub('[^\w\-_\.\,]', '_', str( $input2.element_identifier)) 9 #set identifier2 = re.sub('[^\w\-_\.\,]', '_', str( $input2.element_identifier))