Mercurial > repos > mvdbeek > bam_readtagger

comparison update_mapq.xml @ 19:8d201345f6dc draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit c12b0c1b22f03c95651e19f32a2065a79a57188a
author mvdbeek
date Fri, 31 Mar 2017 16:28:07 -0400
parents 4a14e25b9ea1
children 44bbb5c4553f
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18:4a14e25b9ea1 19:8d201345f6dc
1 <tool id="update_mapq" name="Update MAPQ score" version="0.3.11"> 1 <tool id="update_mapq" name="Update MAPQ score" version="0.3.12">
2 <description>of supplementary alignments</description> 2 <description>of supplementary alignments</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.3.11">readtagger</requirement> 4 <requirement type="package" version="0.3.12">readtagger</requirement>
5 </requirements> 5 </requirements>
6 <version_command>update_mapq --version</version_command> 6 <version_command>update_mapq --version</version_command>
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="aggressive"><![CDATA[
8 update_mapq --source_path '$source_path' --remapped_path '$remapped_path' --output_path '$output_path' 8 update_mapq --source_path '$source_path' --remapped_path '$remapped_path' --output_path '$output_path'
9 ]]></command> 9 ]]></command>