Mercurial > repos > mvdbeek > bam_readtagger

comparison deploy.sh @ 2:865589023a17 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit ca94ae0d3a25a511f7d2c98712efc37b332642e7
author mvdbeek
date Fri, 17 Feb 2017 12:24:49 -0500
parents 815e4eea0e1d
children e68a225983d5
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1:815e4eea0e1d 2:865589023a17
1 #!/bin/bash 1 #!/bin/bash
2 # this script uploads galaxy tools in the current directory to the galaxy toolsheds 2 # this script uploads galaxy tools in the current directory to the galaxy toolsheds
3 set -e 3 set -e
4 4
5 CURRENT_DIR=$(dirname $0) 5 CURRENT_DIR=$(dirname $0)
6
7 echo "Installing planemo ... again"
8 pip install planemo
6 9
7 echo "Deploying to Testtoolshed ..." 10 echo "Deploying to Testtoolshed ..."
8 planemo shed_update -r --force_repository_creation -t testtoolshed --shed_key_from_env TTS_KEY "$CURRENT_DIR" 11 planemo shed_update -r --force_repository_creation -t testtoolshed --shed_key_from_env TTS_KEY "$CURRENT_DIR"
9 12
10 echo "Deploying to Toolshed ..." 13 echo "Deploying to Toolshed ..."